AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01777 ATGATGCCATCGCCGGCGGTCGATTTCAACTTCGAAAGCACCAACACTACGCCCTACGCCACCGCACCTTCCACCCCTCAACGATTTCCCACTTTCTTCTACAGCGCACCCACCAGCCCTACGCATCAATTTCTTCTAATCAACTCCTCTCCAGCTTCTCCCACCGATCCTTTGAAAAAACCCCTCTTTGAAGATGAAGATGAAGATGAAGATGATTTTGCTTTCGATTTCAGTGGACGGCTGGAACCGCCTTCTATCTCAGCAGCCGACGAACTCTTTCATTGCGGTAAGATCAAGCCATTGAAGCCTGTTTCAAATCATTCACGCTTCACAGAAAAAGCGTTTTCTCCCCGGTCTAAGAAGAAAGATTTGGATCCTTTCACATCGGCATTAAATCAAACAGCTGGTGATCAAAATCCATCCAAGCGGGGAAGGGAAAAAACGACCACCACCAGAGACAAAGCATCATCATCATCGTTCAGAATTTCCGATATTTTATCCGACGAAGAGACCCATCATCAGAAAAACTCAATCACTCATTCTTCGTCGTCGTCGTTAACGTGGTACAACAAGTGGAACCTCAAGAATCTGCTCTTGTTCCGAAGTGCGTCGGAGGGAAGTGCGAGGAGGATCAAGGAGCCAGTGAACAAATACTCGAGGATAAGGAAAAGCGATGAGGATGAGGTGGTGAAGAAGTCAAGCTTTAGAAGTCGGGACGGTAGGAGGGTGATGAGGAAGGTTTCTGCTCATGAGATACATTACACGGCGAACAGGGCGGTGGCGGAGGAGATGAAGAAGAAGACATTCCTGCCGTACAAATCAGGGTTATTAGGATGCTTGGGGTTCCATAACAATGGCGGCAGTGTTCATGAGATTTCAAGAGGGATTAATTGTGTTATGAGACAAAGAGGAGACTGA 918 47.17 MMPSPAVDFNFESTNTTPYATAPSTPQRFPTFFYSAPTSPTHQFLLINSSPASPTDPLKKPLFEDEDEDEDDFAFDFSGRLEPPSISAADELFHCGKIKPLKPVSNHSRFTEKAFSPRSKKKDLDPFTSALNQTAGDQNPSKRGREKTTTTRDKASSSSFRISDILSDEETHHQKNSITHSSSSSLTWYNKWNLKNLLLFRSASEGSARRIKEPVNKYSRIRKSDEDEVVKKSSFRSRDGRRVMRKVSAHEIHYTANRAVAEEMKKKTFLPYKSGLLGCLGFHNNGGSVHEISRGINCVMRQRGD 305
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01777 305 PANTHER OS07G0619500 PROTEIN 20 284 - -
Ccar2g01777 305 Pfam Protein of unknown function (DUF1645) 89 271 IPR012442 -
Ccar2g01777 305 MobiDBLite consensus disorder prediction 108 180 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01777 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:63756301 Ccar6g00267 Ccar-Chr6:8238993 dispersed
Ccar Ccar-Chr10:27117090 Ccar2g01777 Ccar-Chr2:63756301 transposed
Ccar Ccar-Chr3:10148910 Ccar2g01777 Ccar-Chr2:63756301 transposed
Ccar Ccar-Chr2:63756301 Ccar4g00481 Ccar-Chr4:14479333 wgd