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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01784 ATGTCGAGTACGCCGGCGCTCGATCCGACGCAGCAACAACCGTCACCATTCCCGCCGGTGATACAAGAACAAGCCTACAAACCTCATTCGAGTCACGGGTCAGTCGGACCGGTAATCGGAGTTCTTGCGGTGATTATGGTAATGGGTGCGGTGGCTGTAATGATAGGCAGGCTCTGTTCCGGTCGCCGGATCATGGGTCACGGGCAATACGACTTTGAAGGGTGGGTGGAGACCAAATGCTCCACGTGTATCGACGGTAGGCTTGGCCCTCCTCCTCGGCGGGAAACGGTGCCTGTGGTGTTGGTGGAGACCACCAACGCCTCGTCAAGTGAAGCTGCTGCTGCCGCCGCCGCGGCCCCAGCTGAAATTCCGGCCGACGAAGCGCCACCACAGGCGGATGAAGAAGCGGCTACTCATCAACCACCACAAGAACAGCACAATCTACGTGAGAACTGA 456 58.55 MSSTPALDPTQQQPSPFPPVIQEQAYKPHSSHGSVGPVIGVLAVIMVMGAVAVMIGRLCSGRRIMGHGQYDFEGWVETKCSTCIDGRLGPPPRRETVPVVLVETTNASSSEAAAAAAAAPAEIPADEAPPQADEEAATHQPPQEQHNLREN 151
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01784 151 PANTHER OS02G0708000 PROTEIN-RELATED 9 126 - -
Ccar2g01784 151 MobiDBLite consensus disorder prediction 108 151 - -
Ccar2g01784 151 MobiDBLite consensus disorder prediction 1 31 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01784 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
38052 Ccar17g00440 Ccar2g01784
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:63844008 Ccar9g00315 Ccar-Chr9:9162399 dispersed
Ccar Ccar-Chr17:5185137 Ccar2g01784 Ccar-Chr2:63844008 wgd