AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01791 ATGGCCCCCAAGATCATGCTTTTGACGGTCATGGTGACCATGGTCATCGCGGTTCGTTCTTTGGACACCAACAGCGTCTTCAATCCATGTTCAGATGCGAAAGTTAAGAGACGAGATGGATTTACATTTGGATTCGCATTTTCTTCCAAACAATCCTTCTTCAAAAACCAAATCCAGCTTTCACCCTGTGATCGTCGTCTCTCCCTTGGTGGAACCGACGCTCAACTTGCCATTTTCCGGCCAAAAGTCGACGAGCTCACTTATCTCACCATTAATGGCACCCACTTTGATCCGGCGAAAGCGGGTGGATATATGGTGGCATTTGCGGGAAGACAATATGCAGCGAGATCCATACCGACTTTTGTCGCTGATAAATCCAATATCATCACAAGTTTCACTCTGGTTCTTGAATTTGAAGAAGGCACCCTTGTGAACTTACATTGGAAGAAATTCGGGTGTAAATCATGTGCAGAGAGATCCGCCGTTTGCCTCAACAATCAAGACTGTGCTACACCAATCTCGAAATGCAAGGCTAATGGTGGATCAGTTGATTGTAAAATTAGCGTGCAATTAGCATTCTCGGGTACAGATAAGGCCTTGGATGTTCTTAACTCGTGGTACGAGGTTGAACAATTTCGACAATATTCGCTAATTGGGTTGTACCAAGACATCAATGACATGGTTATGGGTCCATAA 696 44.68 MAPKIMLLTVMVTMVIAVRSLDTNSVFNPCSDAKVKRRDGFTFGFAFSSKQSFFKNQIQLSPCDRRLSLGGTDAQLAIFRPKVDELTYLTINGTHFDPAKAGGYMVAFAGRQYAARSIPTFVADKSNIITSFTLVLEFEEGTLVNLHWKKFGCKSCAERSAVCLNNQDCATPISKCKANGGSVDCKISVQLAFSGTDKALDVLNSWYEVEQFRQYSLIGLYQDINDMVMGP 231
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01791 231 PANTHER DPH3 HOMOLOG-RELATED 12 226 - GO:0005829(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01791 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr10:25193924 Ccar2g01791 Ccar-Chr2:63944252 dispersed
Ccar Ccar-Chr2:63944252 Ccar11g00478 Ccar-Chr11:5098443 transposed