AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01793 ATGGCAACAGCCTCCGCCACTCTATCTCCGGTCACCTTCACGGCGGCAGCCGTCGTTGCTCCCACCAGATCTTCTGCCAGAATCACCACCACCAAAGTCAACTACATCAAGGGACTCAACTCATTTGGTGGTCTTAAAGCTCACAACACTCTCGCTTCATTGGGACTCCCTGTTTCCACTGAACAGCAATTCGCAAACTTTGTTTGCTCCTTGAAGAAACCATCATCCAACAACCGCCGTGGCGGTGGCGGAGCTCTCACCTCCACCTGCAATGCGGTGGCTGAGATTTTCAGGATAGCTGCAATCATGAATGGACTTACTCTTGTTGGAGTTGCAGTTGGCTTCATTCTTCTCCGAATCGAAGCATTTGTTGAAGAAGCAGAGTAA 387 50.39 MATASATLSPVTFTAAAVVAPTRSSARITTTKVNYIKGLNSFGGLKAHNTLASLGLPVSTEQQFANFVCSLKKPSSNNRRGGGGALTSTCNAVAEIFRIAAIMNGLTLVGVAVGFILLRIEAFVEEAE 128
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01793 128 SUPERFAMILY PetM subunit of the cytochrome b6f complex 93 125 - -
Ccar2g01793 128 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 128 IPR053333 -
Ccar2g01793 128 Pfam PetM family of cytochrome b6f complex subunit 7 95 121 IPR012595 GO:0009512(InterPro)
Ccar2g01793 128 Hamap Cytochrome b6-f complex subunit 7 [petM]. 92 125 IPR012595 GO:0009512(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01793 - -