AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01794 ATGGGAACACTTGCTGGACATCTAGTCCCTGGCTCAGTCCTTGCTCTCCTTGGCTTATGGCACATCATCAATACAATCAAATCCTACCACCTAAAAGGCTCAACCCACTTCAGGTCAAGCTTTTGGCATCCCTTTCTCACCCCTTTCCCCAAACTGGTGTACTTAGAGCTTCTGCTTATTGTTTTTTTCTCCATATTTTCCATAGTTATGCAGGTTTTGGACTACCCTTTGTTTACCTTAGCTTTCAAGCTCAATAACTATGAGCATGCCACCATGTTTCTCCACCTAGCTATATATGCGGGTTTTACCCTTTTAAGTGAACTCACTCATAAATCAGACACCTTGTTTGAGGTTTCTGGAATTCTTGCTGCTTCTGTTTTCAGTCAAGAGCTTTTCTTGCTCCATTATCACTCGGCCGATCATGTTGGACTCGAGGGCCATTACCATTGGCTAATGCAACTTATTGTGTTGGTCTCTCTTCTAACAGCTATATTTGCGACCACTTTCCCATCCAGCTTCCCTACATCGCTTGTTCTTTCTATTTCTGTTGCCTTCCAGGGGTTTTGGTTCATTAATATGGGATTCATGTTATGGGTTCCTGAACTTGTCCCCAAAGGGTGTGTCCTACGGTTGGGTGATGGCGGCGATAGCGACATGCACGGGGCCATCGTGTGTGGGACCCATGAGGCACGGTTAAGGGCTAGAGCCATGGCTAATTTGCAATTCAGTTGGATACTGGCTGGGATTTTGATCTTTGTGGGATGTTTATGCTTATCTTTCCCAAAAAAGGTCACTCATAGGGGTCAATCGGCCGAGTATGAACGACTCCATAGTCGAATTGCTGAGGTCCCTCTATCGGTAACAGGATTCAAGCAAGTTCATCCATAG 888 45.27 MGTLAGHLVPGSVLALLGLWHIINTIKSYHLKGSTHFRSSFWHPFLTPFPKLVYLELLLIVFFSIFSIVMQVLDYPLFTLAFKLNNYEHATMFLHLAIYAGFTLLSELTHKSDTLFEVSGILAASVFSQELFLLHYHSADHVGLEGHYHWLMQLIVLVSLLTAIFATTFPSSFPTSLVLSISVAFQGFWFINMGFMLWVPELVPKGCVLRLGDGGDSDMHGAIVCGTHEARLRARAMANLQFSWILAGILIFVGCLCLSFPKKVTHRGQSAEYERLHSRIAEVPLSVTGFKQVHP 295
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01794 295 Pfam Family of unknown function (DUF716) 118 257 IPR006904 -
Ccar2g01794 295 PANTHER PROTEINASE INHIBITOR I4, SERPIN (DUF716)-RELATED 1 280 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01794 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr11:1917081 Ccar2g01794 Ccar-Chr2:63971570 dispersed
Ccar Ccar-Chr15:20302412 Ccar2g01794 Ccar-Chr2:63971570 dispersed