Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g01798 | ATGGATGACGTACCAGGATCCATGGGTACCAGTGCAGGATTCGCTCTCAGGCTCGGTCAGACCATCTTCTCCTCTGCTGCTCTTCTCTTCATGGCGCTTGGTGGTCAATTCTACAGCTATACCTCCTTCTGCTTCTTGGTGACAATAATGGGTTTGGTTATTCCATGGAGTTTCACATTGGCATTTCTTGATGGATACTCTGTTCTTGTTACACACCCAGTTCGACAAAAAGGAATCTTGTTCATCATCGTTATAGGGGATTGGGTGTTATTGACTCTCACACTAGCTGCAGCCTCTTCAGCTGCGGCCGTGGTGGATATCTTGCTGAGGGCAGAAGGATCCGTCTGCCCTCCAAAAATCTGCAGCCGCTATCTACTTTCCACCATATTTGCTTTCTTGTCGTGGTTCTTGTCTATGGCTTCTTCTCTATTCAATCTATGGCTTCTTCCATCTTTGTGA | 459 | 46.84 | MDDVPGSMGTSAGFALRLGQTIFSSAALLFMALGGQFYSYTSFCFLVTIMGLVIPWSFTLAFLDGYSVLVTHPVRQKGILFIIVIGDWVLLTLTLAAASSAAAVVDILLRAEGSVCPPKICSRYLLSTIFAFLSWFLSMASSLFNLWLLPSL | 152 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g01798 | 152 | Pfam | Casparian strip membrane protein domain | 8 | 137 | IPR006702 | - | |
| Ccar2g01798 | 152 | PANTHER | CASP-LIKE PROTEIN 5B3 | 1 | 151 | IPR045009 | GO:0016020(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g01798 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr2:64082603 | Ccar5g01378 | Ccar-Chr5:34379757 | wgd | |
| Ccar | Ccar-Chr2:64082603 | Ccar7g00310 | Ccar-Chr7:3365031 | wgd |