AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01806 ATGGAGCTTCGGTCGATTCAATCGCCTGTCGTTAGTAGTCTAGCTACACAAGGCTTCATTGAAAAGCAGCAACTCATATGCTACCGCCAGCTGATCAGATCCTTCGGTACCAAGGGAATTCTTCACTCAAATTCTATCAAGCTTAGACCTGTTCGATTCAAAGCTCAGGCCTCAAGTGCAGCAAAAACTGGTTCGCAGCCTGCTGACATGATTTCAAAAAATGGTGAAAACGACGGAAATCTCATCTTTGTTGCTGGAGCGACTGGCAAAGTTGGTTCGCGAACAGTAAGGGAGCTTTTGAAATTAGGATTTAATGTTCGAGCTGGTGTGCGAAGCACTCAAAGAGCAGAAACTTTGGTGAAAAGCGTGCAGCAGATGAAACTTGATGAAGCATTATCTGATGGAAGTCAGCGTAAGAGAACACTTCCAAGAAGTCTCCCTGCCAGTCATAATTTCCGTGACCTCCCAGCTATAGAGAAGCTTGAACTTGTGGAGTGTGACTTGGAGAAACCAGAGCAGATTAAGCCGGCATTGGGCAGGGCTTCAACTGTTATATGCTGCATTGGGGCCAGTGAGAAGGAGATATTTGATGTTACTGGACCATACCGAATTGATTTTCAAGCCACAAAAAACCTTATTGACGCAGCTACTGCTTCAAAGGCAAAACAGTTTATTTTGGTCACATCTTTGGGAACAAACAATTTGTTCTGGGGAGTCCTATGCTGGAAAAGGAAGGCTGAAGAAGCACTTCTTGCTAGTGGTATTCCTTACACAATAGTGAGACCTGGAGGTATGGAGCGTCCTACCGATTCTTTCAAGGAAACTCATAATCTTACCCTCTATACAGAAGATACTTTATTTGGCGGTTTAGTATCGAATCTTCAGGTGGCAGAACTCCTTGCGTTCATGGCCAAAAACCCTGCTCTCTCTTATTGTAAAGTTGTGGAAGTAATTGCAGAAACAACAGCACCATTGACCCCGATGGGGGATCTCCTAGCAAAAATACCACCTCAACGTGCTGTAACTTACCCACCCAAGGAACCAGAAGCTAGCAAAGAACCTGAGCCTGTCCCCAAGGGCTCCAGTTCAGAGAGTTCAAGCATTGTCACTGAAACACAATCCCATTATGAGAACCTGAAGCCACCTACCTCTCCAACCCCAACCCCAAGTGGATCCAAAGAGACACCATCTTATTCCTCTTCTACACCAGAAATTGCATCAGAATCCACTACAAGCGTTGATAAGATTGTGGAGATTGAAGATGGCGGTGATGCCAAAGAGGATCCTCCTCAAACTTTGACTTCCAGTAATTCACCCTACTATGTATATGACAATCTAAAACCCCCTACATCGCCATCTCCAAGTTCACCATCGGTATCACCACCATCAACGATCCCTGTAGACAACGGGTCTCCTAGTGCTTCCACACCAGAAAACACCTCAGCTAGCACAGTAGTGAAGCCAAGGCCACTTTCACCTTATCCCATGTATGAAACCTTGAAGCCTCCAAGTTCTCCAATCCCTTCCACCCCTCAGTAA 1539 45.48 MELRSIQSPVVSSLATQGFIEKQQLICYRQLIRSFGTKGILHSNSIKLRPVRFKAQASSAAKTGSQPADMISKNGENDGNLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAETLVKSVQQMKLDEALSDGSQRKRTLPRSLPASHNFRDLPAIEKLELVECDLEKPEQIKPALGRASTVICCIGASEKEIFDVTGPYRIDFQATKNLIDAATASKAKQFILVTSLGTNNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLYTEDTLFGGLVSNLQVAELLAFMAKNPALSYCKVVEVIAETTAPLTPMGDLLAKIPPQRAVTYPPKEPEASKEPEPVPKGSSSESSSIVTETQSHYENLKPPTSPTPTPSGSKETPSYSSSTPEIASESTTSVDKIVEIEDGGDAKEDPPQTLTSSNSPYYVYDNLKPPTSPSPSSPSVSPPSTIPVDNGSPSASTPENTSASTVVKPRPLSPYPMYETLKPPSSPIPSTPQ 512
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01806 512 MobiDBLite consensus disorder prediction 390 413 - -
Ccar2g01806 512 MobiDBLite consensus disorder prediction 429 444 - -
Ccar2g01806 512 MobiDBLite consensus disorder prediction 495 512 - -
Ccar2g01806 512 Pfam NAD(P)H-binding 151 307 IPR016040 -
Ccar2g01806 512 FunFam Protein TIC 62, chloroplastic 78 338 - -
Ccar2g01806 512 CDD SDR-a5 82 321 - -
Ccar2g01806 512 MobiDBLite consensus disorder prediction 358 381 - -
Ccar2g01806 512 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 459 IPR044719 -
Ccar2g01806 512 MobiDBLite consensus disorder prediction 341 512 - -
Ccar2g01806 512 MobiDBLite consensus disorder prediction 462 487 - -
Ccar2g01806 512 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 336 IPR036291 -
Ccar2g01806 512 Gene3D - 80 336 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01806 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:64149525 Ccar5g00728 Ccar-Chr5:11342701 dispersed