Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g01826	ATGCCTTCAAGAAGAAGAACGCTGCTGAAGGTCATCATTCTTGGCGACAGCGGATATGTGAACAAGAAGTTTAGCAATCAATATAAGGCAACAATAGGAGCTGATTTCTTGACAAAGGAAGTGCAATTTGAGGACAGGCTCTTCACTCTGCAGGAGAGCACATGTTGGTCTTTAGAGGTTGGTCACTTTCTTGAGGTGAGATCCCTTGGATGTAGTTCTTATTTTGAGGTATCGAAAGGCTTTTTGTATTCTGATGCCGCTGTAGAATTGATCTGGGATACAGCAGGACAGGAAAGATTTCAGAGCCTTGGTGTTGCTTTCTACCGCGGAGCAGATTGTTGTGTCCTAGTGTACGACGTGAATGTTCAGAAATCCTTTGATAGTCTCAACAATTGGAGGGAGGAATTCCTCATCCAGGCAAGTCCTTCAGATCCAGAAAATTTTCCGTTTGTGGTTCTGGGTAACAAGGTATCTGAGAAAAAAGCCAGGGCTTGGTGTGCCTCAAAAGGCAACATACCATATTTTGAGACCTCTGCAAAGGAGGGAATCGATGTTGAAGAAGCTTTTCAAGTTATTTCAAAGAATGCCTTGACTATTGGAGATGAGGAAGAAATATATGTGCCGGACACCATTGATGTAGGGAGCAACAGCCAACAGAGGGCCTCCGGATGCGAATGCTAA	681	44.05	MPSRRRTLLKVIILGDSGYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQESTCWSLEVGHFLEVRSLGCSSYFEVSKGFLYSDAAVELIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVQKSFDSLNNWREEFLIQASPSDPENFPFVVLGNKVSEKKARAWCASKGNIPYFETSAKEGIDVEEAFQVISKNALTIGDEEEIYVPDTIDVGSNSQQRASGCEC	226

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g01826	226	ProSiteProfiles	small GTPase Rab1 family profile.	3	226	-	-
	Ccar2g01826	226	SMART	rab-sub-5	9	199	-	-
	Ccar2g01826	226	PANTHER	RAB FAMILY	1	51	-	GO:0005774(PANTHER)
	Ccar2g01826	226	SMART	ras-sub-4	6	199	-	-
	Ccar2g01826	226	Gene3D	-	2	207	IPR027417	-
	Ccar2g01826	226	PRINTS	Transforming protein P21 ras signature	80	102	-	-
	Ccar2g01826	226	PRINTS	Transforming protein P21 ras signature	9	30	-	-
	Ccar2g01826	226	PRINTS	Transforming protein P21 ras signature	174	196	-	-
	Ccar2g01826	226	CDD	Rab7	9	197	-	-
	Ccar2g01826	226	Pfam	Ras family	90	196	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Ccar2g01826	226	SMART	rho-sub-3	11	199	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Ccar2g01826	226	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	5	198	IPR027417	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g01826	K07897	Ras-related protein Rab-7A

Event-related genes

Select	Gene_1	Gene_2	Event_name
	38835	Ccar2g01826	Ccar8g00829

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr2:13685879	Ccar2g01826	Ccar-Chr2:64472413	dispersed
	Ccar	Ccar-Chr2:64472413	Ccar8g00161	Ccar-Chr8:2245292	dispersed
	Ccar	Ccar-Chr2:64472413	Ccar8g00829	Ccar-Chr8:21893372	wgd