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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01832 ATGGCTTCGGTATGCAGATCACCGTTAATGTCTGGTGCGCGAAAAATTGCAGCTCAAACGAAGCTAACTTCAAGAACCCTAAACCCTAAATGTGTGCCCATTTCTCCATTTTCATCATCTACAACAGCAGTCCCTCGTGCAGCTTCAAGGATTGTTGGAGCATTGGGAATGGTGGAGTCCATGATGCCTCTTCACAGCGCAATTGCATCTGCTCGTCTCAAGTCGAGTCTTGCTGTTAATTCCACCTACTGGAGCTGGCTTTCACAAGGTACTTATATAATTTTCTTTTCTTCAAATCGTGTCTTGGAACATCATTGTGACAAGGTTTGCAAGGATGAGCATATGGAAGTTTGCTTCAAGTTATGA 366 43.72 MASVCRSPLMSGARKIAAQTKLTSRTLNPKCVPISPFSSSTTAVPRAASRIVGALGMVESMMPLHSAIASARLKSSLAVNSTYWSWLSQGTYIIFFSSNRVLEHHCDKVCKDEHMEVCFKL 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01832 121 PANTHER OS02G0230000 PROTEIN 1 89 IPR043459 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01832 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
38838 Ccar2g01832 Ccar8g00835
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr11:8039453 Ccar2g01832 Ccar-Chr2:64567083 dispersed
Ccar Ccar-Chr1:14517776 Ccar2g01832 Ccar-Chr2:64567083 dispersed
Ccar Ccar-Chr2:64567083 Ccar8g00835 Ccar-Chr8:21971875 wgd