AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01853 ATGAACTCTATCAATGTCAAAATGGAAAAGGCCAACGCGATTTTGCGGTTCCACAGGCTTCAAAAAATCACGACTCTGTTCCGATTCGTTGAGATGTTTGTTTTTCTTATTTTGATTTCTAGGTTTTCCTCTCAACTGCCGTTCGCCGTTAGAATCTCCGCTGATCATTTCAGAGGAATCTCCTTCGCGGTTTTTAGCCCTAGGTTTGTTTTTGTGATCGGAAACGTGATCGTCTTAATTCTGTTATTCAAATCTCGAGTTGTTGAAAACGGAGATGGCGACGGAAAAGTTGATTTTTACGACGAGTACGTTCGAAGATGTGAGAAAAGCGTAGTAAATACTAGTAGCATTTCCACTACTGCCATTATTCCGAGTAAAGAAAAGAAGATTTGCAGGAGTCAATCGGAGAATCTAATGATTGTGGAACGCAGAGATGATCAAACTCACCGGAAACTACAGCGATCGGTGACTGAGAGAAAAATGTCAAAGAAACTTGATCGTGGTGGTGGTGAGACGGCGGCTCAGGAGAAGAGTTGCGCCGTTGAGGATGAACTGAGCAGCGAAGAATTCCGGCGAACGGTGGAGGCATTTATTACAAGGCAACAACAATCTCTAAGAGATGAAGAGTTGTCTCCGGTAGCATACATCGGTGCATAA 657 43.23 MNSINVKMEKANAILRFHRLQKITTLFRFVEMFVFLILISRFSSQLPFAVRISADHFRGISFAVFSPRFVFVIGNVIVLILLFKSRVVENGDGDGKVDFYDEYVRRCEKSVVNTSSISTTAIIPSKEKKICRSQSENLMIVERRDDQTHRKLQRSVTERKMSKKLDRGGGETAAQEKSCAVEDELSSEEFRRTVEAFITRQQQSLRDEELSPVAYIGA 218
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01853 218 PANTHER TRANSMEMBRANE PROTEIN 1 211 - -
Ccar2g01853 218 MobiDBLite consensus disorder prediction 146 179 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01853 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
38035 Ccar17g00398 Ccar2g01853
38841 Ccar2g01853 Ccar8g00846
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr7:6563259 Ccar2g01853 Ccar-Chr2:64890070 transposed
Ccar Ccar-Chr17:4580181 Ccar2g01853 Ccar-Chr2:64890070 wgd
Ccar Ccar-Chr2:64890070 Ccar8g00846 Ccar-Chr8:22150052 wgd