Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g01854	ATGGCGGTTGCTTATTCTTCTTCTCACCTTCAACTTCAACCACTGTCTTTCACCAAAACCCTAAATCGTTCTTCGAACTCGATCACACCCAAAACCCTAGTTTCCTTCAAACCCAATTCAAAAACTCTTGGTATCCGAGCAATCATATCTCAAACACCTCCAGAAACCCAGAAATTTGAGCATTGTTTCACCAAAAAAGATGATGGGTATTTGTACTGCGAGAATCTTAAGGTTCAAGAAGTCATGGAGGCCGTTGAAAGGAGGCCATTTTATCTTTACAGTAAGCCTCAGATAACTAGAAATGTGGAGGCTTATAAGGATGCTTTGGAGGGATTGAATTCGGTTATTGGGTATGCAATTAAGGCCAATAATAACTTCATGATTTTACAGCATTTGAGAAGTTTAGGTTGTGGGGCTGTTTTGGTTAGTGGCAATGAGCTCAGATTGGCTCTTCGTGCTGGTTTTGATCCCACCAGGTGTATTTTTAATGGAAATGGGAAGCTTTTGGAGGATCTTGTTCTTGCTGCTCAAGAAGGTGTCTTTGTTAATATAGACAGTGAATTTGATCTGGATAATATTGTATCAGCTGCAAGAATTGCTGGAAAGAAGGTCAATGTACTGCTTCGAATCAATCCGGATGTTGACCCTCAGGTCCATCCTTATGTTGCAACCGGGAACAAGAACTCCAAATTTGGTATTAGAAACGAGAAGTTGCAATGGTTTCTAGATGCCGTTAAGTCGTACCCTGATGAACTTAAGCTAGTTGGAGCTCATTGTCATCTTGGATCCACCATTACCAAGGTCCGGGAGCTGGTCTTGTCTCGAAACCTTAATCTCATTATTGAACCCGGGAGGTCACTGATTGCGAATACTTGCTGCTTTGTTAATCGTGTCACTGGTGTAAAAACAAACGGCACGAAAAACTTTATTGTGATCGATGGCAGCATGGCTGAACTTATCCGTCCTAGCCTATACGATGCTTATCAACACATAGAATTGGTTTCTCCTCCACCTCCCGATTCTGCGGTTTCGACTTTTGATGTCGTGGGCCCGGTCTGCGAGTCGGCCGATTTTTTGGGGAAAAACAGGGAACTTCCCGCTCCAGCCAGGGATTCTGGGCTTGTAGTTCATGATGCCGGTGCCTACTGCATGAGCATGGCTTCAACTTACAACCTTAAGATGCGCCCACCGGAATACTGGGTTGAAGAAGATGGATCAGTAGCCAAAATCAGGCATGGGGAGACTTTTGAAGATCATATGAGATACTTTGAGGGACTCTCACTCTAA	1287	43.59	MAVAYSSSHLQLQPLSFTKTLNRSSNSITPKTLVSFKPNSKTLGIRAIISQTPPETQKFEHCFTKKDDGYLYCENLKVQEVMEAVERRPFYLYSKPQITRNVEAYKDALEGLNSVIGYAIKANNNFMILQHLRSLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNIDSEFDLDNIVSAARIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKSYPDELKLVGAHCHLGSTITKVRELVLSRNLNLIIEPGRSLIANTCCFVNRVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPPPPDSAVSTFDVVGPVCESADFLGKNRELPAPARDSGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSVAKIRHGETFEDHMRYFEGLSL	428

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g01854	428	Gene3D	Lyase, Ornithine Decarboxylase; Chain A, domain 1	272	412	IPR009006	GO:0003824(InterPro)
	Ccar2g01854	428	Gene3D	Alanine racemase	96	271	IPR029066	-
	Ccar2g01854	428	PANTHER	DIAMINOPIMELATE DECARBOXYLASE	55	269	-	GO:0008836(PANTHER)\|GO:0009089(PANTHER)\|GO:0009507(PANTHER)
	Ccar2g01854	428	FunFam	Diaminopimelate decarboxylase	279	420	-	-
	Ccar2g01854	428	PRINTS	Ornithine-diaminopimelate-arginine (ODA) decarboxylase family signature	138	150	IPR000183	GO:0003824(InterPro)
	Ccar2g01854	428	PRINTS	Ornithine-diaminopimelate-arginine (ODA) decarboxylase family signature	118	136	IPR000183	GO:0003824(InterPro)
	Ccar2g01854	428	PRINTS	Ornithine-diaminopimelate-arginine (ODA) decarboxylase family signature	380	393	IPR000183	GO:0003824(InterPro)
	Ccar2g01854	428	Pfam	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	97	271	IPR022644	GO:0003824(InterPro)
	Ccar2g01854	428	ProSitePatterns	Orn-DAP-Arg decarboxylases family 2 pyridoxal-P attachment site.	118	136	IPR022653	-
	Ccar2g01854	428	SUPERFAMILY	PLP-binding barrel	88	290	IPR029066	-
	Ccar2g01854	428	FunFam	Diaminopimelate decarboxylase	95	277	-	-
	Ccar2g01854	428	Pfam	Pyridoxal-dependent decarboxylase, C-terminal sheet domain	272	380	IPR022643	GO:0003824(InterPro)
	Ccar2g01854	428	CDD	PLPDE-III-DapDC	89	401	IPR002986	GO:0008836(InterPro)\|GO:0009089(InterPro)
	Ccar2g01854	428	SUPERFAMILY	Alanine racemase C-terminal domain-like	267	421	IPR009006	GO:0003824(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g01854	K01586	diaminopimelate decarboxylase [EC:4.1.1.20]