Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g01858	ATGGCAGATCAAGTGTTGGAGGGTAGCCAACCAGTTGATCTCTCCAAGCACCCATCTGGAATCGTTCCTACTCTTCAGAACATTGTGTCTACTGTCAATCTTGATTGCAAGCTAGACCTCAAGGCAATTGCGTTGCAAGCTCGCAATGCAGAATATAATCCGAAGCGTTTTGCTGCTGTAATCATGAGGATAAGAGAACCAAAAACGACGGCCTTAATCTTTGCTTCTGGGAAAATGGTATGTACAGGAGCCAAGAGCGAACAGCAATCGAAATTGGCGGCACGGAAGTATGCCCGGATTATTCAGAAACTTGGGTTCCCAGCCAAATTTAAGGATTTCAAAATTCAGAACATTGTGGGCTCATGTGATTATGAACCAGAACTGTTCCCTGGACTTATATATCGGATGAAACAGCCAAAAATCGTTCTGCTTATTTTTGTTTCTGGGAAAATTGTTCTTACAGGCGCCAAGGTTAGAGAAGAAACTTATACTGCATTTGAGAACATATATCCGGTCCTTACTGAATTTAGAAAGAATCAGCAGTGA	546	42.31	MADQVLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQQ	181

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g01858	181	PRINTS	Transcription initiation factor TFIID signature	115	131	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Ccar2g01858	181	PRINTS	Transcription initiation factor TFIID signature	68	86	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Ccar2g01858	181	PRINTS	Transcription initiation factor TFIID signature	49	68	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Ccar2g01858	181	PRINTS	Transcription initiation factor TFIID signature	25	40	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Ccar2g01858	181	SUPERFAMILY	TATA-box binding protein-like	21	114	-	-
	Ccar2g01858	181	Gene3D	-	123	176	IPR012295	-
	Ccar2g01858	181	PANTHER	TATA-BOX BINDING PROTEIN	122	181	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)\|GO:0006352(PANTHER)\|GO:0016251(PANTHER)\|GO:0140223(PANTHER)
	Ccar2g01858	181	SUPERFAMILY	TATA-box binding protein-like	110	179	-	-
	Ccar2g01858	181	Gene3D	-	30	115	IPR012295	-
	Ccar2g01858	181	Gene3D	-	26	122	IPR012295	-
	Ccar2g01858	181	CDD	TBP-eukaryotes	22	176	IPR033710	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Ccar2g01858	181	Pfam	Transcription factor TFIID (or TATA-binding protein, TBP)	120	176	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Ccar2g01858	181	Pfam	Transcription factor TFIID (or TATA-binding protein, TBP)	23	104	IPR000814	GO:0003677(InterPro)\|GO:0006352(InterPro)
	Ccar2g01858	181	FunFam	TATA-box-binding protein 2	30	115	-	-
	Ccar2g01858	181	ProSitePatterns	Transcription factor TFIID repeat signature.	124	173	IPR030491	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g01858	K03120	transcription initiation factor TFIID TATA-box-binding protein

Event-related genes

Select	Gene_1	Gene_2	Event_name
	38027	Ccar17g00389	Ccar2g01858
	38844	Ccar2g01858	Ccar8g00851
	38845	Ccar2g01858	Ccar8g00900

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr11:1495908	Ccar2g01858	Ccar-Chr2:64960485	transposed
	Ccar	Ccar-Chr17:4467483	Ccar2g01858	Ccar-Chr2:64960485	wgd
	Ccar	Ccar-Chr2:64960485	Ccar8g00851	Ccar-Chr8:22239785	wgd