Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g01877	ATGGATCGGATGAAATCTTCCTTAGAATTAATCGAATTCAACTCAATGGCGTCTTCTTCATCTTCATGGTGGCAATCGTTCCTCTCTCCGGCCAAGAGTTCCTTCACCGCTCTCTGCTTCAAACGCCTCCAAGAATACGCCATTAAAGCCAAAGTTAAGGTGATGAGATTACCAGAAGAGAAGAAACCGTTAGCAAGTCTTGAGGAGATGGAGAAGATTATAGGGTATAAGTTCAAGAAAAAGATTCTATTGCAACAAGCTTTTACACATCCAAGTTATCATGGCTCTGAATCGTATGAAAGACTTGAGTATGTTGGTGACTCCATTCTCAATTTTCTAATCAGTAAACAACAGTTCTTTATGTATCCGGATCTCCCACCAGGGTCGTTGACTGCTCTCCGAGCTGCCAATGTTGATACTGAGAAGCTAGCACGTGTAGCGGTTAAATATAACTTCCATAAGTACATACGCCATGAAAATCCGACGCTTAGTAAGCAAATTCGAGTCTTTACGAGAGCTCTTGAAAAGTACCCTCTACATTCATATGGATTAATCGATGCTCCAAAAACTTTAGCTGATATTGTTGAATCCACAATAGGGGCCATCTACGTCGACAGCAATTCCTCAATCGATACTACGTGGGAGGTGGCTAAGATTCTACTCGAGCCCATGATCACTCCTGAAATGCTCCAAACGAACCCGGTGAGGAAGCTCAATGAACTCTGCCACAAAAAGAAACTGAAGATACGATTTAGAGATAAATGGCTAAAAGAAGGCGTGTACGAAGTTTTTATCGATAATAAACTTAGAGGAAGAGGTGAATACCAAGCCAAGAAGGAAATCGCGTTGAACAGAGCAGCCGAGGATGCATGTAACAACATCATCAACGGTCCAGATTGCTGA	903	42.08	MDRMKSSLELIEFNSMASSSSSWWQSFLSPAKSSFTALCFKRLQEYAIKAKVKVMRLPEEKKPLASLEEMEKIIGYKFKKKILLQQAFTHPSYHGSESYERLEYVGDSILNFLISKQQFFMYPDLPPGSLTALRAANVDTEKLARVAVKYNFHKYIRHENPTLSKQIRVFTRALEKYPLHSYGLIDAPKTLADIVESTIGAIYVDSNSSIDTTWEVAKILLEPMITPEMLQTNPVRKLNELCHKKKLKIRFRDKWLKEGVYEVFIDNKLRGRGEYQAKKEIALNRAAEDACNNIINGPDC	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g01877	300	Pfam	Ribonuclease III domain	100	206	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Ccar2g01877	300	SMART	riboneu5	82	230	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Ccar2g01877	300	ProSiteProfiles	Ribonuclease III family domain profile.	67	207	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Ccar2g01877	300	PANTHER	DICER-RELATED	50	295	-	GO:0003723(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)\|GO:0030422(PANTHER)
	Ccar2g01877	300	Gene3D	Ribonuclease III domain	62	233	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Ccar2g01877	300	SUPERFAMILY	dsRNA-binding domain-like	189	294	-	-
	Ccar2g01877	300	CDD	RIBOc	83	230	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Ccar2g01877	300	FunFam	Endoribonuclease dicer-like 1	61	228	-	-
	Ccar2g01877	300	SUPERFAMILY	RNase III domain-like	66	227	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Ccar2g01877	300	ProSitePatterns	Ribonuclease III family signature.	100	108	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Ccar2g01877	300	Gene3D	-	234	299	-	-
	Ccar2g01877	300	Pfam	Double-stranded RNA binding motif	234	293	IPR014720	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g01877	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr2:65186455	Ccar8g00986	Ccar-Chr8:23860055	dispersed
	Ccar	Ccar-Chr2:65175420	Ccar2g01877	Ccar-Chr2:65186455	tandem