AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01892 ATGGATGTACTCTTCAATTCAATCGACGTTCGGGATTTACTATCTTCACACGATCTAGACGACTCTTCGCCGCTCGCCGCCCCAGATCTTCGCCTCCTCATCGATCGTCTCCAAGTCCGGTCACTCGACATTAAGTCCAAAGTTCACAATTACATAGTCTCTCACAATGATGACTTCTCTGCCCTATTTTCTCGCTGCTCCGACGCTGTTATTAACTCTGAGCAACTGTCCTATCAAGTATCCAACCTCGTCAATCTATTATCATCGGATCGTCAACCGATCGATGTCAAGATCAAAGAAACAGTCGAACAGGTTAGGAGGAAACGCATTGAAACGAAGGAGAAGAAGGAAACGCTAGATTTAGTGAAGGTAGTGTTGAAATTGAGCCAGGAGTTGAGTGTTGTGGAGAATGATTTGAAGGTTGGAAAGGTCGTTGAGGCGGCGAAGGCCCTTACAGACTTGAAGGTGGCGTTACGAATAAGAGATAATGTGGAAGATCGCTCGGGGGAAAGGGAGCCGATGGTATTTGGTTTGTTAAGAAAGAAATGGACAGATTGCTTCGAAGAGATACAAGAGGTGCTAGTGAAGTTTGTGGAAAATGCAGTGAGATTCGATCAGCAGTCCAACGCTGTTTATGTCAAGAATACAATGGCTATGAATGATATTCAAGCGGTCGAGCTTAATACTGTATTGAAAGCAATGCATGTGGTTGGCATTTTAGATTATGGGCTCGCCAAAGTAGCAGACTTGATGACCAGATATGTGATAGCTCCTGCAGTGCAGAGTGGTCCTCATAGTTTTTCTGTAGAAGAGAGAACGCTAGATTCAGGATGTATGGCTGAGGTAGTTCTGAGGATAACTCCGCCTTCTGATCCTCAGGTTGAGAACTTGGATGCTGAAACCATATATTCTGGAATTAATGTGGTCATTCAATTTATTTTCAACTTTATTTGCTTTAAAAATTCTTCCTGGATGCGGTACTTTGGAAGATTGACATGGCCCCGGATGTCGGAATTGATTATTTCAAACTTCCTTTCTAAGATTGTTCCTAACGATGCATCCAAACTTGCTGACTTCCAAACAATAAGACAACTCACTTTTGAGTTTGAGTCATCTCTTAAAGAAATTATGTTCATCTCCTCTGGCAAAGATGAAAGGTTGAGCAACTTTGCCGATAATGTTGAAGTTCATTTTGCTACAAGGAAGAAGGTTGAAATTTTAGCAACAGCCAGGGACCTGCTTTTACATTCAGATTTTAATCTTCCTAAGGACTATTCAAGGAATAATGCAGAATTCAAGAATGGTGGTACTGTAGACTTACTTTTCTCGTCTGAGAGGTGTGTCATATCTGAAGCAGCTTCGCAGCTAATTGAACTTGTGCATCAAACACTCAAGGATGTTTGCTTGTCATCTGCAACAGTGGCTTTAGAATTCTACCATGCTGCTAGGGATGCTCTACTTCTATATGAAGCTGTTATTCCTGTTAAGTACCAGTCCGACTTTCCGACTTCCATGAAGGGAGCTGTGTTTATTGATTTGGGTATAAGATACAAGCTGATGGCAGAAGAGATATTACAAAGACAAATACAGCTTGTTAAACATAATTTGATGGAGGCCGTTGATGGTGCTGATGGATTTCAGAACACCCATCAACCAAAGCGATACGAATCTGCAAAATTCAGTATTGATCAGGTAGCTTTTATCCTTGAGAAAGTGCGCATAATATGGGAGCCACTGTTGCTACCGTTGACGTATAAGGGAAGTATGTGCACAGTCGTGGAGGCTCTTCAAAGGTTAATTCATATGCTGCTGGAAAGCCTTTCTGCTTTATTGGAGTCGCTGGTTGCTATGAATCAAACAACAAAACCACAAGACGCATCATCAGGCTCTATTGATGATCTGATACCATCACTGAATATGTTGGACTTGCCTCTGAAGTCCATTACTGCAAGTTGGGAAAGCGGGGAGCTGGCCAAGTGTGGTTATACTTCATCTGAGGTGAGAGACTTCATCAAAGCAATATTTACAGATTCACAGTTACGAAAAGAATGCTTGTGGAGGATCGAAAATATCAAGTTTTAA 2082 41.88 MDVLFNSIDVRDLLSSHDLDDSSPLAAPDLRLLIDRLQVRSLDIKSKVHNYIVSHNDDFSALFSRCSDAVINSEQLSYQVSNLVNLLSSDRQPIDVKIKETVEQVRRKRIETKEKKETLDLVKVVLKLSQELSVVENDLKVGKVVEAAKALTDLKVALRIRDNVEDRSGEREPMVFGLLRKKWTDCFEEIQEVLVKFVENAVRFDQQSNAVYVKNTMAMNDIQAVELNTVLKAMHVVGILDYGLAKVADLMTRYVIAPAVQSGPHSFSVEERTLDSGCMAEVVLRITPPSDPQVENLDAETIYSGINVVIQFIFNFICFKNSSWMRYFGRLTWPRMSELIISNFLSKIVPNDASKLADFQTIRQLTFEFESSLKEIMFISSGKDERLSNFADNVEVHFATRKKVEILATARDLLLHSDFNLPKDYSRNNAEFKNGGTVDLLFSSERCVISEAASQLIELVHQTLKDVCLSSATVALEFYHAARDALLLYEAVIPVKYQSDFPTSMKGAVFIDLGIRYKLMAEEILQRQIQLVKHNLMEAVDGADGFQNTHQPKRYESAKFSIDQVAFILEKVRIIWEPLLLPLTYKGSMCTVVEALQRLIHMLLESLSALLESLVAMNQTTKPQDASSGSIDDLIPSLNMLDLPLKSITASWESGELAKCGYTSSEVRDFIKAIFTDSQLRKECLWRIENIKF 693
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01892 693 Gene3D - 515 692 IPR046362 -
Ccar2g01892 693 PANTHER CENTROMERE-KINETOCHORE PROTEIN ZW10 4 502 - GO:0006888(PANTHER)|GO:0007094(PANTHER)|GO:1990423(PANTHER)
Ccar2g01892 693 Pfam Centromere-kinetochore protein zw10, C-terminal 442 501 IPR048343 -
Ccar2g01892 693 Pfam Centromere-kinetochore Zw10 N-terminal 37 131 IPR009361 GO:0000278(InterPro)|GO:0000775(InterPro)|GO:0005634(InterPro)
Ccar2g01892 693 Pfam ZW10 C-terminal helical domain 594 688 - -
Ccar2g01892 693 Pfam Centromere-kinetochore protein zw10, middle domain 179 414 IPR048344 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01892 K11578 protein transport protein DSL1/ZW10