AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01893 ATGAGGAAGCTCTACAACCACAATAAAGGCAAAATCCATCCATCACCGCCGCCCACCACCACCACCGCCGACCACTTATCTTTGCTACCGGTGGCCATAGCCGCTCTTGCCGCCGCCCTTGCACCGGAAGACAAAGAAGTCTTGGCATACCTTCTCTCATGCTCTCTAACCACCACCACCAACAACAACAATAAAAACTTCTCCGGCAACACCAAACCCACCAACAAAACTAGCGGCGGAGACGGAGGCGGCGGTGGCGGAAACCATCCTCCCCAATTCAATTGCAACTGCTTTACATGCTACACCAGTTACTGGGTTCGTTGGGATGCTTCGCCAAACCGACAAATGATTCATGAAATTATCGATGCTTACGAAGACGGATTGATTCATAACAAAAAGAGTGGGAAGAACAAGAAAGAAAGAAGGAAGAACAAAGTAATTTCTTCATCTTCCGCTTCTCCACACCCTCCACCGCCGCTTTCCGCCGCCGAGAAAGTTTCTGACGCGCCACCGCAAGTTGAGGAAAACAAGATTGAAGATAATGATGCTGAAGATACATTGATGATGGGGTCATCATCAGAGAAAGGATCAGTAAGAAAAATCGTAAGTTTCTTAGGAGAAAGGATTTGGGGTGTTTGGGGATGA 645 48.06 MRKLYNHNKGKIHPSPPPTTTTADHLSLLPVAIAALAAALAPEDKEVLAYLLSCSLTTTTNNNNKNFSGNTKPTNKTSGGDGGGGGGNHPPQFNCNCFTCYTSYWVRWDASPNRQMIHEIIDAYEDGLIHNKKSGKNKKERRKNKVISSSSASPHPPPPLSAAEKVSDAPPQVEENKIEDNDAEDTLMMGSSSEKGSVRKIVSFLGERIWGVWG 214
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01893 214 MobiDBLite consensus disorder prediction 1 21 - -
Ccar2g01893 214 MobiDBLite consensus disorder prediction 62 78 - -
Ccar2g01893 214 MobiDBLite consensus disorder prediction 62 85 - -
Ccar2g01893 214 PANTHER F12F1.11-RELATED 1 214 - -
Ccar2g01893 214 MobiDBLite consensus disorder prediction 132 193 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01893 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr13:97727 Ccar2g01893 Ccar-Chr2:65463566 dispersed
Ccar Ccar-Chr2:65463566 Ccar8g00914 Ccar-Chr8:22913533 dispersed