Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g01898	ATGTCAACAACCACCATATATCTCATCTTCATATTCTCTCTCTTCATTCCTCCACACCCAGCCACCGCCGATCAGTCATTTATCTCGCTCCTCATAACCCAAAACGGCCTTGATTTCGTCAAGGATTTGCTCATATCGGAAGCGATTTCTCTACTGACACCCCTCTGGCTTACCAAAATCGAAAGGACCATTAAAATCCCAGTGGTTGGTAAAGTGCATATTGCTCTTTCAGACATCACTGTCAATCGGGTCAATATCGGGTCATCATACATCAAACCCAGTGTCACAGGTGTTTCAATTGATGGGTCAGAGGTCACCTGTGAGTTGAATATGAAATGGCATTATTCTTACGGTACTTGGCTTGCCCCAATTTCAATTTCAGATGGTGGGACTGCTTCCGTTCAGGTTAATGGTGCCGGAGTTGGTTTAACACTAGGCTTGGATAATCAAGAAGGATCTTTGAAACTTTCGACCATCGAATCCATAGAAAAAGCAATCACCGAGAAACTGAAGACAGGAGTTTCAAAGCTCGGATCTTTTCTGCAAGCTCTTCCAAAACGAATTCCAGTGGATGATATTGCCGCATTGAATGTTACCTTTGTTAATGACCCTTTCTTGAGTGATGATTCATTAGGGTTCGAGATAAATGGGTTATTCATCGAATCTAAAAAAGACACACTTTCACGCCGCAAAGCTTTACTCCCACCAGTTTCTTGTTCAGATTCCTCAAAAATGGTTGGAATTGCACTAGACGAAGCTGTTTTCGTGTCTGCAGCAGCCTTATACTATAACGCTATGTTTATGCATTGGGTTGTGGATAAAGTTCCTGAACAATCTCTTCTGAATACGGCTGGATGGAGGTTTATTGTTCCCCAACTCTACAGGAAATACCCGAATGCTGATATGAATTTGGACATCTCTCTGTCTGATCCTCCGGTTGTGCAGATATTGTGGCAGAATATTGATGCTACCGTTTATGCAGATTTGATCATAGATGTTCTTGAAGGCGATGAGACGATACCCGTTGCTTTTGAAGTTATCGGAAATAATCTTGCTGGTCATTTGAGACTGGATGATTTCACGATGTCGTTGAAATGGAGCAAGATTGGCACCTTGCACATGTTTCTGGTTCAGCCGGTGATGTGGACACTGATCGAAACTGTTTTCATGCCATATGTGAATGCACAGCTTGGGAACGGATTCCCGCTACCTATAATCCATGGGTTTACGCTTCAAAATGCCGAGATAGTATCCACAGATTCTAGAATCACAGTCTGCAGCGACGTCACTTATCAAGAATCGTTTGATCGTAGCAGCTACGCTTCATAG	1329	42.89	MSTTTIYLIFIFSLFIPPHPATADQSFISLLITQNGLDFVKDLLISEAISLLTPLWLTKIERTIKIPVVGKVHIALSDITVNRVNIGSSYIKPSVTGVSIDGSEVTCELNMKWHYSYGTWLAPISISDGGTASVQVNGAGVGLTLGLDNQEGSLKLSTIESIEKAITEKLKTGVSKLGSFLQALPKRIPVDDIAALNVTFVNDPFLSDDSLGFEINGLFIESKKDTLSRRKALLPPVSCSDSSKMVGIALDEAVFVSAAALYYNAMFMHWVVDKVPEQSLLNTAGWRFIVPQLYRKYPNADMNLDISLSDPPVVQILWQNIDATVYADLIIDVLEGDETIPVAFEVIGNNLAGHLRLDDFTMSLKWSKIGTLHMFLVQPVMWTLIETVFMPYVNAQLGNGFPLPIIHGFTLQNAEIVSTDSRITVCSDVTYQESFDRSSYAS	442

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g01898	442	SMART	bpi2-2	240	427	IPR001124	GO:0008289(InterPro)
	Ccar2g01898	442	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	30	207	IPR017943	GO:0008289(InterPro)
	Ccar2g01898	442	Gene3D	-	49	161	-	-
	Ccar2g01898	442	Gene3D	-	169	439	-	-
	Ccar2g01898	442	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	211	431	IPR017943	GO:0008289(InterPro)
	Ccar2g01898	442	Pfam	LBP - BPI - CETP family, C-terminal domain	235	431	IPR001124	GO:0008289(InterPro)
	Ccar2g01898	442	PANTHER	OS06G0309200 PROTEIN	161	436	IPR045897	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g01898	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr2:65519483	Ccar6g00568	Ccar-Chr6:16429212	dispersed