AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01909 ATGACCATGGTTTTAAGCTCTACATCCATTATATTCATCTCCATCATTCTTATTTCTCTTTTCTTCACTTCATCTGCTCAAACCTGTTCAAACCACACTTTTACATCCAAAAGGGTCTTCACTTCTTGCCAAGATCTTCCATATCTCAATGCCCATCTCCACTGGACCTATTTCAAATCCTCCAAACAAGCCAAGATCGCATTTCGAGTCCAACACACCCCCAATGGATGGACCGCGTGGGCAATCAATCTGAACCGACGAGCCATGGTTGGATCGCAGGCCCTGCTGGCTTTTCGCGACAGTAAAGGCAGGATGTCGGCATATACAACATTGATCACTGGATACAATCCGTCAATGCAGCCCAGGAAACTTCAGTTCCGTGTTTCGAAGCTCTCGGCAGACTCTGGCCTCATCCTATTTTTTCACATTCTTGCATCTAATTTCAACATATCACCTGCACGAACGTGCTCAAATCACAAATTCACAGCCAAAAGAGTCTACAGTTCTTGCCAAGATCTTCCCCATCTATCTGCCCATCTCCATTGGACCTACAACTCATCCACGGGCCAAGCCCAGATCGCATACAGAGCGAGACAAGGGCCCTCTGGATGGGTTGCTTGGGCCATAAACCCGAACCAAATAGGTATGGTTGGGTCAGAAGCACTGGTGGCTTTCCACAACAGTAATGGGAGCATGGCAGTATATCCAACAATGATAACAAGTTATAGCCCATCAATGCTGCCCGGAGATCTTAGCTTTCAAGTTTCAGGTCTAACTGCTGAGTACTCGAATAATGAGATTACCATTTATTCTGTTGTGGGTCCGTTTGCAGGTGGGTCCCTTGTTAACCAAGTATGGCAAGCCGGGAGCTTGGTTTTGGATGATATCCCTCAAATGCACTCTGTTTCCCAGCAAAATCTTCAATCAACAGGAGAGCTTGATTTCTTATCCGGATAG 957 46.08 MTMVLSSTSIIFISIILISLFFTSSAQTCSNHTFTSKRVFTSCQDLPYLNAHLHWTYFKSSKQAKIAFRVQHTPNGWTAWAINLNRRAMVGSQALLAFRDSKGRMSAYTTLITGYNPSMQPRKLQFRVSKLSADSGLILFFHILASNFNISPARTCSNHKFTAKRVYSSCQDLPHLSAHLHWTYNSSTGQAQIAYRARQGPSGWVAWAINPNQIGMVGSEALVAFHNSNGSMAVYPTMITSYSPSMLPGDLSFQVSGLTAEYSNNEITIYSVVGPFAGGSLVNQVWQAGSLVLDDIPQMHSVSQQNLQSTGELDFLSG 318
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01909 318 ProSiteProfiles DOMON domain profile. 49 185 IPR005018 -
Ccar2g01909 318 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 140 317 - -
Ccar2g01909 318 Pfam Protein of unknown function (DUF568) 216 315 IPR045265 -
Ccar2g01909 318 Pfam Protein of unknown function (DUF568) 89 135 IPR045265 -
Ccar2g01909 318 ProSiteProfiles DOMON domain profile. 176 289 IPR005018 -
Ccar2g01909 318 CDD DOMON-CIL1-like 167 317 IPR045265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01909 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:65620421 Ccar5g00241 Ccar-Chr5:3263594 transposed