Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g01926	ATGTTTTTGGTTGATGTGTCTATTCTGTATTTCTGCAATGTTTCTGCAATCGGGTATTATGTAGGAATGGTGGGGCTATCTGTTGGAGAAAAGCATTTTATACAGGGTGGGATTGCTCAAGACCTTCGTACTGATGGTCGTAAAAGATTAACTTACCGGCCCATTTTTGTGGAAACTGGAGTCATTGCCCAGGCAAATGGTTCAGCAAGAGTTAAGATGGGTAGAACTGAAGTCATAGTAAGTGTGAAGGCCGAGCTAGGAAGACCAAGTTCTTCAGCACCTGACAAAGGAAAAGTTTCCATTTATATTGATTGCAGTCCCACAGCGGCACCACAATTTGAGGGGAGAGGTGGTGAAGAATTGTCGATGGAACTCTCTGCAGCCCTGCGACAATGTCTTTTGGGAGGTAAAAGTGGAGCAGGAGCTGGAATTAATCTTTCCTCTCTGTCAATTGTGGATGGGAAGATCTGTTGGGATTTATATATTGATGGTCTTGTAATTAGTATGGACGGAAACATACTCGATGCTTTAGGTGCTGCCATCAAGGCTGCTTTAAGCAATACAGGTATCCCAAAAGTCAATGTCGCTTCAGCCGCTCCCTCCGATGAACAGCCAGAGGTCGACGTGAGCGATGAAGAGTTTCTACAATTCGACACCACTGCAGTCCCCGTCATAATTACATTAACAAAGATTGGAAGACATTATATTGTAGATGCAACTTCAGAAGAGGAATCACAAATGAGCTCTGCTGTCTCTGTTTCCATCAACAGGCAAGGTTTGATCTGTGGGCTGACCAAAAGAGGGGGAACAGGTTTAGACCCGAGTGTCATTCTTGACATGATATCGGTGGCTAAACATGTCAGCGAGCAGTTAATGAACAAACTGGATTCCGAGATAGCTGCAGCCGAGGCCATGGAAGAGGAGTCATGA	930	44.73	MFLVDVSILYFCNVSAIGYYVGMVGLSVGEKHFIQGGIAQDLRTDGRKRLTYRPIFVETGVIAQANGSARVKMGRTEVIVSVKAELGRPSSSAPDKGKVSIYIDCSPTAAPQFEGRGGEELSMELSAALRQCLLGGKSGAGAGINLSSLSIVDGKICWDLYIDGLVISMDGNILDALGAAIKAALSNTGIPKVNVASAAPSDEQPEVDVSDEEFLQFDTTAVPVIITLTKIGRHYIVDATSEEESQMSSAVSVSINRQGLICGLTKRGGTGLDPSVILDMISVAKHVSEQLMNKLDSEIAAAEAMEEES	309

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g01926	309	CDD	RNase-PH-RRP42	26	297	-	-
	Ccar2g01926	309	Coils	Coil	288	308	-	-
	Ccar2g01926	309	Pfam	3' exoribonuclease family, domain 2	222	285	IPR015847	-
	Ccar2g01926	309	Gene3D	-	25	309	IPR027408	-
	Ccar2g01926	309	PANTHER	EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN	23	303	IPR050590	GO:0000176(PANTHER)\|GO:0000177(PANTHER)\|GO:0000467(PANTHER)\|GO:0016075(PANTHER)\|GO:0017091(PANTHER)\|GO:0034427(PANTHER)\|GO:0034473(PANTHER)\|GO:0034475(PANTHER)\|GO:0034476(PANTHER)\|GO:0043928(PANTHER)\|GO:0071028(PANTHER)\|GO:0071035(PANTHER)\|GO:0071038(PANTHER)\|GO:0071042(PANTHER)
	Ccar2g01926	309	Pfam	3' exoribonuclease family, domain 1	52	191	IPR001247	-
	Ccar2g01926	309	SUPERFAMILY	Ribosomal protein S5 domain 2-like	26	245	IPR020568	-
	Ccar2g01926	309	FunFam	Exosome complex component RRP42	25	308	-	-
	Ccar2g01926	309	SUPERFAMILY	Ribonuclease PH domain 2-like	218	305	IPR036345	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g01926	K12589	exosome complex component RRP42