AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01928 ATGTCAACCACCTCGTCTTCTTCGTCACGTGACGGAGGAGACGGTGGAAATGGAGGTGCCGGAGAGTTTGAAGGACCGTCGCAATCTCGTCAACGCTTCAACAGCGCTGTATGGCCGGAGCCGTTCCTTGAAGCTCTTGCTACTCAAGTCGCTATTGACGCCGCTCTCTCATTTGGCCGCCTTGCCGCTGCTCCTGCTCTCTTCAATCTCTTCCAGGTTTGTAGAACATGGAGAACTGTATCCCAGTCTGATCTCCTATGGCAAACCCTCACACGACGTATTTGGCATCGCAACCATCTCCTCCATCCCTCTTGGCATGATGAATACATTTACCGCCACCGAACTGCTAGAAACTTCCGTGTCAGGAGGTGTTTGTACACAACCCTACACTTCCCTCCCAATGATGACAACACCAACGACAGCCTTTCTTGCCGTTGCCTTGCACTATCTGATTACCACCTAGCCGCTGGATTTTCTGATGGGTCTGTTCGCCTATTTCACCTCCTTACCAGGCTCCACCTGTCCACCTTCCACCCCCACCAACGCAATCATCTTGGCCCATTCTCCCGTGCTGTATGTGGGATCTTTTTTACAGATAACAGGGTAGTTTTTGCCTCCCTCGATGGTGATATTCATGTTGCATCCGTCAATGTTCCAGGAGCTCCACGGAGGGCCCACTTGGGTGATGTGGTCACTGATGGTGTCCTTGTGGATTTCACAGGTGTTCCAAACCGTGCCTTCCATGTACGAAATGGTAATACCGAAGAACTTGTATTCATTGGTGGCACATTGACCGACCCAGATGCTGTAACTGGTTGGCACCTACTGACAGACCTAAGTGAGCAGGTTGGGCGAATCCGCATAACAAGTGAAGATCGGGCGGTGGCTTTCACCAGCAGCAAGGTTCTTGTATTTGATTTGAGAAGCCAAATGATTTTAGGAGAAGAAGAGTTTGTAAGGCGGATTAATGTTGGTGCAGCTGATGCGTATGATAATGCTCTTATGTTCGTAAATAGTAGGGGGGTAGGTAATGTGCGGGAGGTGGGTAGTTTGGAGGAAATGTGTAGGTTCATGGCGAGGGGCGGGGTGATCGGTTGCATGAACGGTGGCTACTGTATAATATGCTGCAGTGGGGGTGGGGTTAGGGTTTGGGAGTTGAATCACGGACAGTACTTGTACAGTTTTAGAGAAAGGGTCGGGGATCGCACGAGTGCCTTGATCGCAGATGAA 1230 50.57 MSTTSSSSSRDGGDGGNGGAGEFEGPSQSRQRFNSAVWPEPFLEALATQVAIDAALSFGRLAAAPALFNLFQVCRTWRTVSQSDLLWQTLTRRIWHRNHLLHPSWHDEYIYRHRTARNFRVRRCLYTTLHFPPNDDNTNDSLSCRCLALSDYHLAAGFSDGSVRLFHLLTRLHLSTFHPHQRNHLGPFSRAVCGIFFTDNRVVFASLDGDIHVASVNVPGAPRRAHLGDVVTDGVLVDFTGVPNRAFHVRNGNTEELVFIGGTLTDPDAVTGWHLLTDLSEQVGRIRITSEDRAVAFTSSKVLVFDLRSQMILGEEEFVRRINVGAADAYDNALMFVNSRGVGNVREVGSLEEMCRFMARGGVIGCMNGGYCIICCSGGGVRVWELNHGQYLYSFRERVGDRTSALIADE 410
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01928 410 Gene3D - 50 121 - -
Ccar2g01928 410 SUPERFAMILY F-box domain 65 117 IPR036047 GO:0005515(InterPro)
Ccar2g01928 410 Gene3D - 123 407 IPR015943 GO:0005515(InterPro)
Ccar2g01928 410 PANTHER WD40 REPEAT PROTEIN 12, 37 21 390 - -
Ccar2g01928 410 MobiDBLite consensus disorder prediction 1 30 - -
Ccar2g01928 410 SUPERFAMILY WD40 repeat-like 140 395 IPR036322 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01928 - -
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Ccar None None None TF SAP