Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g01936	ATGAAGACGACGTCGGCGATCCCTCTTTGTTTCCTCTTACTCATATTTCTCTCCACCACCACCAATGCCCACAATATAACCCATATCCTCGCAAAAAACCCAGAATTCTCAACCTTCAACCACTACCTCACCCTCACTCACCTCGCCGGAGAGATCAACCGCCGCCAGACCATCACCGTTTGCGCCGTCGACAATGCCGCCATGTCGGCGTTGATCGCTAAAGGTCTCTCACTTGTGACGATAAAGAATGTTCTCTCCCTTCATGTTTTTGCAGACTACTTTGGCTCCAAAAAGCTCCACGAAGTCACCAAAGGGTCCACCTCCACCGCCACAATGTACCAAGCCACCGGAGAAGCCCCCGGAACCACCGGGTATGTCCATATCACCGACGTTAAAGGTGGTAAAGTCCGATTCACTCCCGAAGACAATCCCACTCAAACTGACGTCGTTTACGTCAAATCCATCTTAGAAATGCCTTACAACATCTCCGTCATCCAAATTAGTGAAATTCTACAGTCGCCGGAGGCGGAGGCGCCAACGTCGGCGCCGGATCTGAATTTAACGTCGTTGTTACAGCGAGACGGATGTAAAGCGTTTTACAATCTGTTATCGACTTCGGGAGCCATTGGGACGTTTTTAAGCACTGTTGACGGCGGCGTAACGGTGTTCTGTCCCAGTGCAACCGCTGTTGCGGCGTTCGCGCCAAAATACAAGAACTTGACGGCGGAAGAGAAGACGTCGGTTTTGCTTTACCACGGCGTTCCGACCTACAATTCTATGGGGATGCTGAGATCAAGCAACGGATTGATGAACACGTTAGCGACGGAAGGGGCTAACAAATACGACTTCACCGTGAAAAACGACGGCGAGGATGTGAAGTTGAAGACGAAAGTGGTGACGGCGGCGGTCACAGGGACTGTGATTGACGAAGAACCGGTGGCGCTCTATAAGATCGATAAGGTTTTGTTGCCGAGGGAGTTATTCAAGGGAACGGTGGAGGCGGATGAGCCTGCACCTGCGCCCAAGGGGGCGAAGAAGAAGAAGAAGGGGGCAAAGGAAGATGATGATGCGGATTCGCCGGCGTCCGATTCTTCAGACGATGATGATTCCGATGATGTGGCGGATCAGAAGGCTAGTTCCGGCGAGAGGCTGGCGTCGTCGGCAGTTATGGCGGCGTGTCTCCTCCTTGCGTTCATTTAA	1200	52.25	MKTTSAIPLCFLLLIFLSTTTNAHNITHILAKNPEFSTFNHYLTLTHLAGEINRRQTITVCAVDNAAMSALIAKGLSLVTIKNVLSLHVFADYFGSKKLHEVTKGSTSTATMYQATGEAPGTTGYVHITDVKGGKVRFTPEDNPTQTDVVYVKSILEMPYNISVIQISEILQSPEAEAPTSAPDLNLTSLLQRDGCKAFYNLLSTSGAIGTFLSTVDGGVTVFCPSATAVAAFAPKYKNLTAEEKTSVLLYHGVPTYNSMGMLRSSNGLMNTLATEGANKYDFTVKNDGEDVKLKTKVVTAAVTGTVIDEEPVALYKIDKVLLPRELFKGTVEADEPAPAPKGAKKKKKGAKEDDDADSPASDSSDDDDSDDVADQKASSGERLASSAVMAACLLLAFI	399

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g01936	399	MobiDBLite	consensus disorder prediction	333	384	-	-
	Ccar2g01936	399	Gene3D	FAS1 domain	22	170	IPR036378	-
	Ccar2g01936	399	PANTHER	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	4	392	IPR033254	GO:0046658(PANTHER)
	Ccar2g01936	399	MobiDBLite	consensus disorder prediction	359	373	-	-
	Ccar2g01936	399	MobiDBLite	consensus disorder prediction	339	358	-	-
	Ccar2g01936	399	Pfam	Fasciclin domain	34	151	IPR000782	-
	Ccar2g01936	399	Pfam	Fasciclin domain	195	324	IPR000782	-
	Ccar2g01936	399	FunFam	Fasciclin-like arabinogalactan protein 10	175	325	-	-
	Ccar2g01936	399	Gene3D	FAS1 domain	193	324	IPR036378	-
	Ccar2g01936	399	SMART	fasc-3	221	325	IPR000782	-
	Ccar2g01936	399	SMART	fasc-3	59	174	IPR000782	-
	Ccar2g01936	399	ProSiteProfiles	FAS1-BIgH3 domain profile.	23	171	IPR000782	-
	Ccar2g01936	399	SUPERFAMILY	FAS1 domain	190	324	IPR036378	-
	Ccar2g01936	399	FunFam	Fasciclin-like arabinogalactan protein 2	22	164	-	-
	Ccar2g01936	399	ProSiteProfiles	FAS1-BIgH3 domain profile.	183	322	IPR000782	-
	Ccar2g01936	399	SUPERFAMILY	FAS1 domain	29	174	IPR036378	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g01936	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	38010	Ccar17g00311	Ccar2g01936

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr1:10035900	Ccar2g01936	Ccar-Chr2:65920936	dispersed
	Ccar	Ccar-Chr2:65920936	Ccar6g00556	Ccar-Chr6:16284450	dispersed
	Ccar	Ccar-Chr17:3410682	Ccar2g01936	Ccar-Chr2:65920936	wgd