AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g01937 | ATGTATAGGTTTGTCTTCAAAAAGATACGTACGAATTGCATCGACGGTGGTCGAAAGATCTTACAATCTTCAATCTGTACGACAAACTTTAACCCTATCTGTGGAGATTTTCGTCCTGGTGCTGCAGAAGGCTTAAGGGACAAAGCTAGAAGTGCATTCCAAACTAGATACCGATCTTCAACAAATATGGTAACAAACATGGAACATTCGTCAAAGGTTTCAGAAAATGAAGTTGATCATGTTGATATGCTGAATGCCTCATATGATGCTTATGAAGGAGTTACTGTCAACATTAAAAACAACATGGATGAAAATGTCTTTACAACTCTACTTCAAACATCAATATCCCAATGGAGGCAGCAGGGAAAGAAGGGAGTTTGGCTTAAACTGTCTCTTGAACTTGTAAATCTTGTTAAGCCTGCAGTGAAGGAAGGATTTTGGTATCATCATGCGGAACCAACATACTTGATGCTCGTCTATTGGATTCCTGAAACTAATTGTACGCTCCCGTATAATGCTTCCCATCGAGTTGGTGTTGCTGCTTTTGCCTTGAACAGCAAGGGGGAGGTTCTTGTAGTGCAAGAGAAAACTGGACGCTTCAAAGGCAAAGGGATCTGGAAATTACCAACCGGTGTTGTTGAGGAGGGTGAAGATATATGTACAGCTGCAATAAGGGAAGTGAAAGAAGAGACTGGAATTGATACAGAATTTGTTGAAGTCCTTGCATTCAGGCAATGCCACAAGTCATTCTTTAGCAAGTCTGATCTAATGTTTGTGTGTATGCTAAAACCAACATCTCATGATATCGAAAAGCAAGATTCAGAGATTGAAGCAGCTCAGTGGATGCCAGTTGAAGAATATGCCAATCAGCCCTTTGTAAAGAAGCATGAATCCTTTGATCGCATTGCTAAGATATGCATGGGAAAGAAAGATGACAAATTTGTTGGGTTCACTGCATTGCCTACATCAACTGCTACATCTGCCAAGAAGAGCTATTTGTATTCCAATTATCAGGAACACTTGTCTGATTCTTAA | 1035 | 40.1 | MYRFVFKKIRTNCIDGGRKILQSSICTTNFNPICGDFRPGAAEGLRDKARSAFQTRYRSSTNMVTNMEHSSKVSENEVDHVDMLNASYDAYEGVTVNIKNNMDENVFTTLLQTSISQWRQQGKKGVWLKLSLELVNLVKPAVKEGFWYHHAEPTYLMLVYWIPETNCTLPYNASHRVGVAAFALNSKGEVLVVQEKTGRFKGKGIWKLPTGVVEEGEDICTAAIREVKEETGIDTEFVEVLAFRQCHKSFFSKSDLMFVCMLKPTSHDIEKQDSEIEAAQWMPVEEYANQPFVKKHESFDRIAKICMGKKDDKFVGFTALPTSTATSAKKSYLYSNYQEHLSDS | 344 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g01937 | 344 | FunFam | nudix hydrolase 2 | 81 | 167 | - | - | |
| Ccar2g01937 | 344 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 134 | 152 | IPR003293 | - | |
| Ccar2g01937 | 344 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 260 | 284 | IPR003293 | - | |
| Ccar2g01937 | 344 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 172 | 190 | IPR003293 | - | |
| Ccar2g01937 | 344 | ProSiteProfiles | Nudix hydrolase domain profile. | 174 | 306 | IPR000086 | - | |
| Ccar2g01937 | 344 | ProSitePatterns | Nudix box signature. | 211 | 232 | IPR020084 | GO:0016787(InterPro) | |
| Ccar2g01937 | 344 | Pfam | NUDIX domain | 175 | 298 | IPR000086 | - | |
| Ccar2g01937 | 344 | PANTHER | NUDIX HYDROLASE RELATED | 57 | 339 | IPR003293 | GO:0035529(PANTHER)|GO:0047631(PANTHER)|GO:0051287(PANTHER) | |
| Ccar2g01937 | 344 | CDD | Nudix-Hydrolase-12 | 175 | 306 | - | - | |
| Ccar2g01937 | 344 | FunFam | Nudix hydrolase 8 | 176 | 314 | - | - | |
| Ccar2g01937 | 344 | SUPERFAMILY | Nudix | 142 | 305 | IPR015797 | - | |
| Ccar2g01937 | 344 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 176 | 315 | - | - | |
| Ccar2g01937 | 344 | Gene3D | - | 81 | 167 | - | - | |
| Ccar2g01937 | 344 | Pfam | Nudix hydrolase domain | 84 | 162 | IPR040618 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g01937 | K26956 | ADP-ribose/NAD+ diphosphatase [EC:3.6.1.13 3.6.1.22] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr10:79837 | Ccar2g01937 | Ccar-Chr2:65930682 | dispersed | |
| Ccar | Ccar-Chr15:15318519 | Ccar2g01937 | Ccar-Chr2:65930682 | dispersed | |
| Ccar | Ccar-Chr2:65930682 | Ccar6g00525 | Ccar-Chr6:15828388 | dispersed |