AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01941 ATGGCGATTTCCGGCGATGCAGACGCCGATGTATCGAACTATCTCGAGTACCGGTCCAAGAAAGATGAAGCATGGTACACCTCGGCGGTAGTTTTGGAAGACGGAAAGCAGCTCCGCGTGAAGTTCAGGGATTTTGTGCATAGCTACTATGACGAGGTCTTCTCCGTCGCTGATTTCTCGACTAAGTCTGAACTACAAGAATTCCTCCATCGATTCCGTCGTTTGTCCGAGCCGATCGAGGACAATGAATGCTCCAGAGTGATAGCAGACATGATGGTCTGTGCTACTTATAAAGGCGATGGATCAGTTCGATTCTTTGATGCCATTGTTGACTCTAGGGCCATGACCATGAGGAAGGCACCATGGTCAGGCTGGGGAACAAATACCTTCACTTCTACTGCCAAGTGTTCCACAGGATGGAAGAAGACTGTGGTTTCTCCTTCCGCGTCCGATGGAGCCTTCTTGGTGCATTACAAAGAGCATACGCCAGAGAAGTGTTTATGCACCTATTTACTGGTCTGGCAGCATGGTCCTGAAGAGGGCAATATAACAGCAACAAGTATTGAGGATATATGCCTTATTATGCCTGGTGCTGTTGATCCCAAAGTGACTGACTTTGCAAAGATTGTGAAGGAAAAACTTGGTTTAGTTTACAAGAGACCATTTTTGTCTAGAAAAACAAGTTCAAACGAAACTCTAGATGAGTTGCAGGCAAGGAGGGGAGGATTCTACCCTCCACTAAGCGACCATGACAGAGATCTGGGAGGTGTCAAAGAAACTGGCTGTCATCATTACATAATATTAGAGAATTTGGAGAAAGATCTATCTCCATCATCAATGATGGAGTTCTTACACGTGCAAACTTCAATTACACCACAGGCATTTCTTTTTCCAAGCTTGTCAGCAGAAACATATGCAAGAGGAGCAGTTGTGGTGGATAGCAGACCAAAGCTTAAGAGAATATATGAATTTTTAAGCAATCCAAATCATTTTATTGTATCTTCCTCTGGAAGGCCATGGGTAATAGCTGAAGCTGTGCTTAGGACTGGAACTTTTGACACAAACCTGCAGAGCTGTCAGCCATTGTGTTGTAAAGGTGCAAAAGATGTGCTGTATTTTGGTGAGATAGATGGCATTAAGCATAACTTCCAGTGGCGTGGGCCACTCGACATTACATAG 1179 44.7 MAISGDADADVSNYLEYRSKKDEAWYTSAVVLEDGKQLRVKFRDFVHSYYDEVFSVADFSTKSELQEFLHRFRRLSEPIEDNECSRVIADMMVCATYKGDGSVRFFDAIVDSRAMTMRKAPWSGWGTNTFTSTAKCSTGWKKTVVSPSASDGAFLVHYKEHTPEKCLCTYLLVWQHGPEEGNITATSIEDICLIMPGAVDPKVTDFAKIVKEKLGLVYKRPFLSRKTSSNETLDELQARRGGFYPPLSDHDRDLGGVKETGCHHYIILENLEKDLSPSSMMEFLHVQTSITPQAFLFPSLSAETYARGAVVVDSRPKLKRIYEFLSNPNHFIVSSSGRPWVIAEAVLRTGTFDTNLQSCQPLCCKGAKDVLYFGEIDGIKHNFQWRGPLDIT 392
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01941 392 PANTHER SAWADEE PROTEIN 13 352 - -
Ccar2g01941 392 Pfam SAWADEE domain 15 112 IPR032001 GO:0003682(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01941 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:65963831 Ccar5g00854 Ccar-Chr5:16398025 dispersed