Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g01944	ATGGCGGAAGCTTCCAGGATCTTCCAGACCACATTGATGCCTTCATTATCTCAATCATTATCTCTCAGAAAGCCTTGCTGCTCTCAAACGATTTCCCTACGCAGAACCTCACCAGCGCTCATCCGCTGCACGATTTCCACCAGCAGCAGTGATACCACTAAGGCTGCAGCCACGACTCCTCAACCGATACCTTGGGGTTGCGATGTAGATTCTCTGGATAACGCAGCTGCGTTGCAGAAATGGTTGACGGATTCCGGTTTGCCGCCTCAGAAAATGGACATACAGAAGGTTGATATTGGAGAGAGGGGTCTCGTTGCCACTAATAACATCAGGAAGGGCGAAAAATTGCTATTTGTACCTCCGTCACTCGTTATTTCCGCCAATTCGGAGTGGAGTTTTCCAGAGGCCGGGGAAGTTTTGAAGAGATATGATGTACCCGACTGGCCACTGATTGCGACCTACCTAATTAGTGAGGCAAGTCTTATGAAGTCGTCTAGATGGAGCAACTATATATCAGCCTTGCCAAGACAACCTTACTCACTTTTATACTGGACACGTGCAGAATTAGATAGGTACCTGGAAGCATCCCAGATTAGAGAGCGGGCAATCGAAAGGATTAATAATGTAACTGGAACATACAATGACTTGAAGGCAAGGATTTTTTCCAAGCATCCTAATTTATTTCCTGAAGAGGTATTCAATATGGAAACCTTTAGATGGTCCTTCGGCATTCTTTTTTCACGCATGGTTCGATTACCCTCACTGGATGGAAGGGTTGCCTTAGTCCCTTGGGCAGATATGTTGAACCATAGTTGTGATGTAGAAACCTTTTTGGATTACGATAAATCAACCAAGGGAGTTGTATTCACAACTGATCGTCCGTACCAGCCAGGTGAGCAGGTGTTCATTTCGTATGGCAGGAAATCTAATGGAGAGCTCCTGCTCTCTTATGGATTTGTGCCAAGGCAAGGGACAAATCCACGTGACTCGGTTGAACTGCCATTATCGCAGTGTTATCCTTTACAAGTCACTGGTTGGCCATTGGAGTTGATGGCATATGCATATTTGGTCGTCAGTCCCCCGAGTATGATCGGGAAGTTTGAAGAGATGGCTGCTGCAGCATCAAATAAAAGCACCACCAATAAGGACATTAGAATTCCTGAACTAGAGGAACAAGCATTCCAATTTATCTTGGATAGCTGTGAATCCAGCATATCTAAGTACACCAAGTTCCTTCAGGCAAGTGGGTCGATGGATTTGGATATAACATCTCCAAAGCAACTCAACCGGAAAGTGTTCCTTAAGCAGCTAGCCGTGGACTTGTGCAATAGTGAACAAAGGATTCTCTTTCGTGCCCAATACATATTAAGGAGAAGGTTAAGGGATATGAAGAGAGGTGAACTGAAGGCCCTAAGATTGTTTGATAGTGTTACAAAGTTCTTCAACAAATGA	1452	44.83	MAEASRIFQTTLMPSLSQSLSLRKPCCSQTISLRRTSPALIRCTISTSSSDTTKAAATTPQPIPWGCDVDSLDNAAALQKWLTDSGLPPQKMDIQKVDIGERGLVATNNIRKGEKLLFVPPSLVISANSEWSFPEAGEVLKRYDVPDWPLIATYLISEASLMKSSRWSNYISALPRQPYSLLYWTRAELDRYLEASQIRERAIERINNVTGTYNDLKARIFSKHPNLFPEEVFNMETFRWSFGILFSRMVRLPSLDGRVALVPWADMLNHSCDVETFLDYDKSTKGVVFTTDRPYQPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPLSQCYPLQVTGWPLELMAYAYLVVSPPSMIGKFEEMAAAASNKSTTNKDIRIPELEEQAFQFILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKVFLKQLAVDLCNSEQRILFRAQYILRRRLRDMKRGELKALRLFDSVTKFFNK	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g01944	483	Coils	Coil	199	219	-	-
	Ccar2g01944	483	SUPERFAMILY	SET domain	74	322	IPR046341	-
	Ccar2g01944	483	Gene3D	set domain protein methyltransferase, domain 1	43	319	-	-
	Ccar2g01944	483	Gene3D	-	326	467	IPR036464	-
	Ccar2g01944	483	ProSiteProfiles	SET domain profile.	90	306	IPR001214	GO:0005515(InterPro)
	Ccar2g01944	483	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	75	458	IPR050600	GO:0016279(PANTHER)\|GO:0018026(PANTHER)
	Ccar2g01944	483	Pfam	Rubisco LSMT substrate-binding	332	449	IPR015353	-
	Ccar2g01944	483	Pfam	SET domain	102	306	IPR001214	GO:0005515(InterPro)
	Ccar2g01944	483	FunFam	Rubisco methyltransferase family protein	328	465	-	-
	Ccar2g01944	483	PIRSF	RMT-SET	1	336	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)
	Ccar2g01944	483	PIRSF	RMT-SET	335	479	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)
	Ccar2g01944	483	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	317	481	IPR036464	-
	Ccar2g01944	483	CDD	SET-RBCMT	89	320	IPR044431	GO:0016279(InterPro)\|GO:0018022(InterPro)
	Ccar2g01944	483	SMART	set-7	90	312	IPR001214	GO:0005515(InterPro)
	Ccar2g01944	483	FunFam	Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic	58	319	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g01944	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr1:18024758	Ccar2g01944	Ccar-Chr2:66027091	dispersed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Ccar	SET	2.7e-17	No_clan		TR	SET