AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01951 ATGGCGTCCCGGCTGCCCATTGATGACAACTCCAATACAAAATCGGAGGAAGGAACAATCGCATTCCACAAGAAGCGGGCTCGCCGTGTCAGCTTTGCAGAGAACACCTCTGTTCACATATTCGACCGTGATGAAGACTCCGGAACTCCATTGGATCGCAAGCCTCCTAATTCTCCAGCCTCTGCTGAACGCAATAATGAACCAAACCAGTTGTTCTGGAATGTGGAAGAGGATGATAATGATAACAATAACGAGGATGACGACATGGATGAACCCGGATCAAGGAGTCCCTTTTTGCGGTTGGTTGGGTCTCCATCCTCTGGTGGAAGTACCATTGGTTCTGCTAACTCCAACGATGAAGATAATTTTTTTGGTCCTGTATCGGCAAGTTTCATTAGACGAGATATACTGGACTCTGCTGGCTCAGATGGAAATCATGATCAAACTATGGATTCAACAGCCTTTTCAATGCATTTTCGTAGCCTTGCTAGGTCGGACTCAGAAGCAGAATTGAAGACCTCAACAGGGGTTCACCTTTCCTTCGAGGAGAAGACCCCAACTCAGGATTTCATTCCCACAAATACAGGAACTCCAATGCGAATGACACTAGCTAAGAAGCCAAATTATCAGCCTTCTGATTCTACCTCCAAATCAAGCACTTGTTCTGAGTCGAATGATATGAGTATTGATGGAGAATATCATTACAAGTATGACTATGGAGAACTCTCTCCTACATCGGATGCACTCTTGGCAGAAGGCAATAAGGACCTCCATGTGATTGCCCCTTCTAATGATTCTATCTTAAAATCACCAAGAAACACTGAAACAACCAAGGAAGACGGGGCTAATTTCATGGATTTTAGTTGTGACAAAGATAAGGAAGGGAATATTACTCATGATATGGTCAATGAAATTGTTTCTTTTGAGCATAATGGGCTTGGTGTGGCCAATGATGGATCGAAATTTTCTCCTAGCAAGCAGATTGCATTAGGTGTATATTCCCACACATCCGACGCTGAGATTTCTAAATCTTTGTTGGTTGGTTCATCTATTTTGGCTACCCCTATTGCCATGACCAAGGATCTTGTCAAAGATGCATTTCAGATAAAGTCAAGTTTGGACTTCTCTGCTACCAGTCAAGGGAATCATAATCCTAAAAACACAATTTATTTAGGTGATGTTATAGGAAAGGAAGAGAAATCACCTTTTGTACGGTCAGTTAACTCTTTAACTGATAAGCCAAGTCACATACGTTTACATGGCGTTAGTCCATCTAAATCACCATCGGCTGTGACTTCTTCCTATAATCGTTCAAGTGTTTTTGTAAGAACAGAACTTTCGAAACATGGTGGGAGTGTTGCATCCATGCAGAAAAGCATTTCTAAACTCAGAATGCTCGAGGCTTCTCCCTTTTCTGCTGCTTTGAATGCTAGACTTGAAGATTCAACGAAAAAAAGATCCGTAGTTTGCCCATCTAAGATGACTCCTTTGTATACTTTGTTGGGGAAAAACGACAAACCTCTCCTACTCAATCGTATGAATGATATCATGCAATCATCATCTGCTGCTCAGAAGAAGAGAGAAAGAGTAAGTTTAATAAACATGGATGATATTGGGTTAGAGACACCAAAGAATGGTGTCTCTGCGACTCATATGCGAAATTTTGTCAATGTTGCATCACCGATGTTGATACCATCTGAAAGCACATGGTTTAAAGAAAAGTTGCCGACTGATCTCTTGTCATCGGCAGATATCATATATGGTTATAAAGATAATAAAAGCGAAGTTAGTTTACCTCAAAATTTAGGTTATTCTCCACAGAAAAAGTTAAAGATTGTGAATGCATCAGAATTCAAAAGCAGTCCTTTGAGAGATGCAAAACAATTTACCAAGCATAATGAGCCAGTAAAGCTTGTGCCAAGTCATGTTGCAGGGTCAGGGGAAAAGGAAAATGTCACTAATGCAAGCCTTTCTACTACGGCTGCTGATCGGACGGATGCCGATCGGACGGATGCCTTGTACATTGAGGAGATAGAAAAATCTAGTCCAATAATCTCCATTGAAAAGGAAATGGTGGATAGCAGAGAGGTTTTTCTTAATGATGTTCGTTTTAATTCAGAAATGAAAGAGAACTCCACAACCTTATTGAAGGACGTAGAACGTGAGAAGTTTCAACGTAACTTTACGGGAAGTGAAATTGCCAGGGGAGAGGTGAAAAGACCCTCTCTGGCTTTGCATGAAGGAACAGATAAACAATCTTGTCAGAAGAATTTGCATGATCAGTTTTGTCAAAGTCCCCCGAGTAAAACACCATACAATGTGTTGCATGATGACAATGTTGATTCTCAAATGGAGGAAAATGTGCCGTCTCCCAGTCCCCATCGTTTATCCATTGGAGATGTAATCTCTGACCGGCAAACAGAAGCTGATGCTGGGATGGTTGAGAAAACTGCTAGAACTCATAGGAGTCCAAATCTCGGAAGAGGTTATGTAGGCCCTGAACTCTCAAGTGACAATAGGATATCGACGATTAGGCACAATCTTAAACATCCAACTGAGATAAATGCAATACTCTCTAAAGAAATGAGGGAACTTCTATCTCAATCAGTTGATAAGTTTAGTTTGCATTCGATTGATCGTTTGACAGGCATTGTTGAGCAGCTTCTGAGGTCAAAAACATATCAGCTTTTCTCTGAAGAAATCCAGTCTCAGAAGAGTGTAGATGCCAGTAAGTATATTCGAGATAACAGAGCCCCAGAAATGAAAATGCTCTTGTGCCAATTTGTGCATGAGAAAGCAAAGTTGCAGCTACTGCATGTGAAGCGGGAGAGGTTACTGAGCCAAAGTGACAGTGACAACGTGACTTCAATGGAACAGGCAATAGATCATATTGATGGAAGAATTGCAACGATGACCAAATCTTTTCACAAGTCATGTAAAATTAAAGGAGAACCCAGTTCCACGGGCACTATTACATTTGTCAATAATTATCTGATGAAGCAAGCATGCTGCCAGATGATAAGGAAGGATTTGCAGCTTTGGGCCGTGGACAATCTTGAGAATAAGAACGGTTGCCACAGTGTTGTTCTCAATTACCTCAACCTGATGACTCAAAGGCTTACAGTCAATGCTGTTCCAGTCCCAAGCATTTCCATTTTGCATACATTAAATAACGTAAACATCAGCAAGACTTTTAAAGATATGGATGCTTTCACTGCATTTAGATTTGTCTTCAGTACTGAAATAATGCAGAAGCATGTTAGTGCTACAAGTTTGGCGCAAGAAACTCAAGTGACTGGCTCTTGTTTGGGCAATTTGTTAGATGTGGTGACCGAGATACAACTTGCGAGAATAGAGCTTAAAAACCTGATTTCTACACGATTTTGCAAACCCCTAGCTGAACAACTTGAACTGGAGCTCTGTTTCTTTGATTCAAAACATCACAGGAAGGCAACAGTGACTTTAGACACCTCATGTTTGAGA 3483 41.06 MASRLPIDDNSNTKSEEGTIAFHKKRARRVSFAENTSVHIFDRDEDSGTPLDRKPPNSPASAERNNEPNQLFWNVEEDDNDNNNEDDDMDEPGSRSPFLRLVGSPSSGGSTIGSANSNDEDNFFGPVSASFIRRDILDSAGSDGNHDQTMDSTAFSMHFRSLARSDSEAELKTSTGVHLSFEEKTPTQDFIPTNTGTPMRMTLAKKPNYQPSDSTSKSSTCSESNDMSIDGEYHYKYDYGELSPTSDALLAEGNKDLHVIAPSNDSILKSPRNTETTKEDGANFMDFSCDKDKEGNITHDMVNEIVSFEHNGLGVANDGSKFSPSKQIALGVYSHTSDAEISKSLLVGSSILATPIAMTKDLVKDAFQIKSSLDFSATSQGNHNPKNTIYLGDVIGKEEKSPFVRSVNSLTDKPSHIRLHGVSPSKSPSAVTSSYNRSSVFVRTELSKHGGSVASMQKSISKLRMLEASPFSAALNARLEDSTKKRSVVCPSKMTPLYTLLGKNDKPLLLNRMNDIMQSSSAAQKKRERVSLINMDDIGLETPKNGVSATHMRNFVNVASPMLIPSESTWFKEKLPTDLLSSADIIYGYKDNKSEVSLPQNLGYSPQKKLKIVNASEFKSSPLRDAKQFTKHNEPVKLVPSHVAGSGEKENVTNASLSTTAADRTDADRTDALYIEEIEKSSPIISIEKEMVDSREVFLNDVRFNSEMKENSTTLLKDVEREKFQRNFTGSEIARGEVKRPSLALHEGTDKQSCQKNLHDQFCQSPPSKTPYNVLHDDNVDSQMEENVPSPSPHRLSIGDVISDRQTEADAGMVEKTARTHRSPNLGRGYVGPELSSDNRISTIRHNLKHPTEINAILSKEMRELLSQSVDKFSLHSIDRLTGIVEQLLRSKTYQLFSEEIQSQKSVDASKYIRDNRAPEMKMLLCQFVHEKAKLQLLHVKRERLLSQSDSDNVTSMEQAIDHIDGRIATMTKSFHKSCKIKGEPSSTGTITFVNNYLMKQACCQMIRKDLQLWAVDNLENKNGCHSVVLNYLNLMTQRLTVNAVPVPSISILHTLNNVNISKTFKDMDAFTAFRFVFSTEIMQKHVSATSLAQETQVTGSCLGNLLDVVTEIQLARIELKNLISTRFCKPLAEQLELELCFFDSKHHRKATVTLDTSCLR 1161
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01951 1161 MobiDBLite consensus disorder prediction 813 834 - -
Ccar2g01951 1161 PANTHER OS06G0608100 PROTEIN 8 948 - -
Ccar2g01951 1161 MobiDBLite consensus disorder prediction 187 225 - -
Ccar2g01951 1161 MobiDBLite consensus disorder prediction 35 51 - -
Ccar2g01951 1161 MobiDBLite consensus disorder prediction 1 20 - -
Ccar2g01951 1161 MobiDBLite consensus disorder prediction 1 17 - -
Ccar2g01951 1161 MobiDBLite consensus disorder prediction 100 121 - -
Ccar2g01951 1161 MobiDBLite consensus disorder prediction 59 77 - -
Ccar2g01951 1161 Pfam Knl1 RWD C-terminal domain 958 1109 IPR040850 -
Ccar2g01951 1161 MobiDBLite consensus disorder prediction 35 121 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01951 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
38003 Ccar17g00292 Ccar2g01951
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr4:6928896 Ccar2g01951 Ccar-Chr2:66108726 transposed
Ccar Ccar-Chr4:6929355 Ccar2g01951 Ccar-Chr2:66108726 transposed
Ccar Ccar-Chr4:6942760 Ccar2g01951 Ccar-Chr2:66108726 transposed
Ccar Ccar-Chr17:3202036 Ccar2g01951 Ccar-Chr2:66108726 wgd