AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g01962 | ATGGGGTCTATAAAATCTTTCCCATTTCCCTTCTCACTCTCCAAACCTCCACTTCCAGATCCTCTTAATCTTCCAGGCAATCCAAACACATACATTCAGATCATCAAATTTACAGAAATGGCAAAGCAAAAGATTGTGGTGAAGGTGACCATGACCAGCGACAAGAAAACTCGCAAGGCTCTAAAAATCGCCGTTAGTCTATGCGGTGTTGAATCGGCATCAATTGTGGGATCAGATAAAGACCAGATCGCGGTGACTGGTGAAGGAATTGACTCCGTGGAGTTGACGACTTTGCTACGGAAAGGTGTAGGATACACAGAGCTAGTGAGTGTTGGTCCGGTAGAGGAGAAGAAAGAATCGAAGGCAACTGTGGAAATTCATCCTTACCAGTACTACTACGATTACTATGTCCCTTCCTACTATGTCTACGGGATAACTACTTATCTGTCCGAAGAAACTCGTCACATGAACTCCACGATCTCTGAAGAACCAACCAAATCCTCTTCACTTCTCATGTCAAGAGATAAGCTTTTTGTTCTTCTTTCTAGAGACTCTCAGGCGGTCCAAAACAAATACAATCAGATCATCAAATTCACAGAAATGGCGAAGCAAAAGATTGTGGTGAAGGTGACCATGAACAGCGAGAAGAAAAGTCGCAAGGCTCTGAAAATTGCCGTTAGTCTATGCGGTGTTGAATCGGCATCATTTGTGGGATCAGATAAAGACCAGATCGCAGTGACAGGTGAAGGAATCGACTCGGTGGAATTGACGACTTTGCTAAGGAAAGGCGTAGGATACACAGAGCTGGTGAGTGTTGGTCCGGTGGAAGAGAAGAAACCCGAGGTCAAAGAAACGAAGGCAACTGTGGAAACTACCATTTTCGAATCCTCTCATTCTCCGGTTTCTAGAGACTCTCAGGCGATCCAAAACACATACAATCAGATCATCAAATTCACAGAAATGGCGAAGCAAAAGATTGTGGTGAAGGTGACCATGAACAGCGAGAAGAAAAGTCGCAAGGCTCTGAAAATCGCCGYWRGYCTATGCGGTGTTGAATCGGCATCRTTTGTGGGATCAGATAAAGACCAGATCGCGGTGACTGGTGAAGGAATCGACTCGGTGGAATTGACGACTWTSCTAAGGAAAGGCGTAGGATACACASAGCTAGTGAGTGTTGGTCCGGTGGAGGAGAAGAAACCCGAGGCCAAAGAAACGAAGGCAACTGTGGAAGTTCATCCCTACCAGTACTACTATGATTACTATGTCCCTTCCTACTATGTCTATGGGATGGTCCGAAACCCTAAACCCAGCCCGATCCTACTAACCCGCGAAATTCAACTGCAAAAGATTGTGGTGAAGGTGACCATGAACAGCGAGAAGAAAAGTCGCAAGGCTCTGAAAATCGCCGTAGGCCTATGCGGTGTTGAATCGGCATCGTTTGTGGGATCAGATAAAGACCAGATCGCGGTGACTGGTGAAGGAATCGACTCGGTGGAATTGACGACTTTGCTAAGGAAAGGCGTAGGATACACACAGCTAGTGAGTGTTGGTCCGGTGGAGGAGAAGAAACCCGAGGCCAAAGAAACGAAGGCAACTGTGGAAGTTCATCCTTACCAGTACTACTATAATTACTATGTCCCTCCCTACTATGTATATGGGATAGGCTTCATCTCCAAAGATGGAACCTTCCTTTCCCTTCCCATGGCGTTGACGTGGTCGTCGTCTTCATCAGCTGCACCTCTCAGTCTCAACCCCATGGGGATGAGGTCTATAAAATCTTTGCAGCTCCATTCTCACTCTTCAAATCACCATTTTCAAAATCCTCTAATTCTCTCCAGTTTATGGAGACACATATACTCAGATCATCAGATTCACAGAAATGGCGAAGGTGTTGAATCGGCATCATTTGTGGGATCAGATAAAGACCAAATCGCGGTGACCGGTGAAGGAATCGACTCGGTGGAATTGACGACTTTGCTAAGGAAAGGCGTAGGATACACAGAGCTAGTGAGTGTTGGTCCGGTGGAGGAGAAGAAACCCGAGGCCAAAGAAACGAAGGCAACTCAAAATCAAAGAAATCCGATTCCAGTTGCTGCTGCTGCTGCTGCTGCATTTCATCCTCCTTCTCCAGTTCTCTTCTTATATTCGGGAATTCTGAATAGAGCCTTCATCTCCAGAGATGAAATGGCAAAGCAAAAGATCGTGGTGAAGGTGGCCATGCACACCGAGAAGAAAGCTCGTAAGGCTCTTCAGACCGTAGTTAGTTTTTGCGGTGTGGAATCAGCAGCCTTCGAGGGTGCAGATAAAGACCAGATAGCGGTGATCGGAGAAGGAATTGACTCGGTGAAACTGACAGCTAAATTAAGGAAATGCGTAGGACATACAGATCTGGTGAGTGTTGGTGCGGAGGAGGAGAAGAAGAAGGAGGAGGAGAAGAAGAAGAAGGATGAATGCGAAGCATTCATGGAATATTGTCCGTATCCGTATCCATATCCGTACTACTATGGTTGCTATGGTACAACCCCAGCTCCGCATACAGCAGCTTCCTGCTCGCTTTCATGGCTTCTTGAGTTTGTACCGTCTGGGCGTTCATCTTTTCGATCTCCGTTGCCAAATCCATCACTAACTCTATATCTACGATGCTGCTTGAATTGGAACTGGAACTGGAACTGGAACATGAGATTTGAAGTTTTGGAGGGGTGTTGGGGCAGTGGAGAAACGGGTGTGGAATCAGCGGCTTTGATCGGATCAGATAAAAATCAAATCAAAGTGACTGGGGAAGGAATCGACTCAGTCGAACTCGCGACGCTGCTAAGGAAAGGCGTAGGATGCACAGAGCTGGTGAGTGTTGGTCCGGTGGAGGAGAAGAAACCCGCTGTCACCGCTGCTGCTGCCGCCAGTCAAACGCCGGCTACGGTGGTGCCACTGCAAGTTTATCCTCACCATTATAGCTGCTATGGAGGGCCGTACTACCATGTCTACGAAAGTTGCAGCAACGACGATCCCTCTTGTGGCTCTAATTTCCATAATCGATTGTTATCGCAGCAAAACATCGTTGTGAAGGTGGCCATGATCAACGACAAGAAAACTCGTAAGGCTCTGAAGATCGCCGTTGGTGTCTGCGGCGTGGAATCAGCGGCCTTGATCGGTTCAGATAAAGATCAAATCAAGGTGACTGGGGAAGGAATCGACTCAGTCGAACTCGCGAGGCTGCTAAGGAAGGGCGTAGGATGCACAGAGCTGGTGAGTGTTGGTCCAGTTGAGGAGAAGAAACCCGCTGTCACTGCTGCTGCCGCCACTCAAACGCCAGCTAAGGTGGTGCCAGCTACGGTGGTGCCACTGCAAGTTTATCCTCACCATTATAGCTGCTATGGAGGGCCTTACTACCATCAAAATATTGTCGTGAAGGTGTCCATGAACAACGACAAGAAAACTCGTAAGGCTCTCAAGATCGTGGTTGGTGTCTCCGGCGTGGAATCAGTGGCTTTGTTTGGTTCAAATAAAGATCAAATCAAGGTCACGGGTGAAGGAATTGACTCGGTCAAACTGGCGACGCTGCTAAGGAGAGGTGTAGGATGCACAGAGCTGGTGAGTGTTGGTCAGGCGGAGGAGAAGAAACCCGCTAACACCACCACCACTGCTGCCGCCAGTGTGGAATCAGCGGCTTTGATCGGATCAGATAAAAACCAAATCAAAGTGACTGGGGAAGGAATCGACTCAGTCAAACTCGCGACGCTGCTAAGGAAAGGCGTAGGATGCACGGAGCTGGTGAGTGTTGGTCCGGTGGAGGAGAAGAAACCCGCTGTCACCGCCGCTGCTGCCGCCAGTCAAACGCCGGCTACGGTGGTGCCACTGCAAGTTTATCCTCACCATTATAGCTGCTATGGAGGGCCGTACTACCATGTCTACGAAAGTTGCAGCAACGACGATCCCTCTTGTGGCTCTAATTTCCATAATCGATTGTTATCGCAGCAAAACATCGTTGTGAAGGTGGCCATGATCAACGACAAGAAAACTCGTAAGGCTCTGAAGATCGCCGTTGGTGTCTGCGGCGTGGAATCAGCGGCCTTGATCGGTTCAGATAAAGATCAAATCAAGGTGACTGGGGAAGGAATCGACTCAGTCGAACTCGCGAGGCTGCTAAGGAAGGGCGTAGGATGCACAGAGCTGGTGAGTGTTGGTCCAGTTGAGGAGAAGAAACCCGCTGTCACTGCTGCTGCCGCCACTCAAACGCCAGCTAAGGTGGTGCCAGCTACGGTGGTGCCACTGCAAGTTTATCCTCACCATTATAGCTGCTATGGAGGGCCTTACTACCATGTCTATGAAATAAGTAGGAAAGAAGCTTCCCCTCTAATGGCGTTTACATCGTCTTCCGGCCCTCCACTGTATACATGGATTCCTCTACAAATACTGCCCTCACTAAACCTTCTTCTTCATCCTGCCCTTCCTCTCCTCTCCCATTTCTACTCCAAACCCACATATCCAGATCACCATCAACTTCATCTAGACATGGCCAAGCAAAATATTGTCGTGAAGGTGTCCATGAACAACGACAAGAAAACTCGTAAGGCTCTCAAGATCGTGGTTGGTGTCTCCGGGGTGGAATCAGTGGCTTTGTTTGGTTCAGATAAAGATCAAATCAAGGTCACGGGTGAAGGAATTGACTCGGTCGAACTGGCGATGCTGCTAAGGAAAGGTGTAGGATGCACAGAGCTGGTGAGTGTTGGTCAGGTGGAGGAGAAGAAACCCGCTACCACCACCACCACTGCTGCTGCCGCCAGTCAAACTCCAGCTACGGTGGTGCCGCTGCAAGTTTATCCTCACCATTATAGCTGCTATGGAGGGCCGGCAGAAGCTTCCCCTGACCCTCTTATGGCGTTTACGTCGTCTTCCGGCCCTCCACTGTATACATGGATTCCTCTACAAATACTGCCCTCACTAAACCTTCTTCAAAATATTGTCGTGAAGGTGTCCATGAACAACGACAAGAAAACTCGTAAGGCTCTCAAGATCGCCGTTGGTGTCTCCGGCGTGGAATCGGTGGCTTTGTTTGGTTCAGATAAAGATCAAATCAAGGTCACGGGTGAAGGAATTGATTCGGTCGAACTGGCGATGCTGCTAAGGAAAGGTGTAGGATGCACAGACCTGGTGAGTGTTGGTCAGGTGGAGGAGAAGAAACCCGCTACCACCACCAGTACCACTGCTGCCGCCAGTCAAACTCCAGCTACGGTGGTGCCGCTGCAAGTTTATCCTCACTATTATAGCTGCTATGGAGGGCCTTATCATCGATCAGTTGGCTTCAATTCAATTCAATTCAATTTTTCAATTTTGCAGCAAAAGATTGTAGTGAAGGTGAGCATGAACAACAGCAAGAGAACTCGTAAGGCTTTGCAGATCGCTGTCGGTGTCTCCGGTGTGGAATCAGCGTCTTTGATGGGGGGTTCAGAAATAACGGTGACCGGTGATGGAATTGACTCGGTCCGACTCGTGATGTTGTTAAGGAAATCTGTGGGATACACAGAGCTGGTTAGTGTTGGTCCCGTGGAGGACAAAACTCCAGCTGCTACTGCTACTGCCACCGCCATCGACGATGCCACTGGTCAACAGGAAGAGAAGATGGTGGCAATGCCGTGGGATGATTGTCCGCATGACCATTTTATCAGCTATGGGACACCGTATCATGTTCATGTATATGAAAGCACCTACAACCATCCCTCATGCACCATTATGTGA | 5733 | 48.7 | MGSIKSFPFPFSLSKPPLPDPLNLPGNPNTYIQIIKFTEMAKQKIVVKVTMTSDKKTRKALKIAVSLCGVESASIVGSDKDQIAVTGEGIDSVELTTLLRKGVGYTELVSVGPVEEKKESKATVEIHPYQYYYDYYVPSYYVYGITTYLSEETRHMNSTISEEPTKSSSLLMSRDKLFVLLSRDSQAVQNKYNQIIKFTEMAKQKIVVKVTMNSEKKSRKALKIAVSLCGVESASFVGSDKDQIAVTGEGIDSVELTTLLRKGVGYTELVSVGPVEEKKPEVKETKATVETTIFESSHSPVSRDSQAIQNTYNQIIKFTEMAKQKIVVKVTMNSEKKSRKALKIAXXLCGVESASFVGSDKDQIAVTGEGIDSVELTTXLRKGVGYTZLVSVGPVEEKKPEAKETKATVEVHPYQYYYDYYVPSYYVYGMVRNPKPSPILLTREIQLQKIVVKVTMNSEKKSRKALKIAVGLCGVESASFVGSDKDQIAVTGEGIDSVELTTLLRKGVGYTQLVSVGPVEEKKPEAKETKATVEVHPYQYYYNYYVPPYYVYGIGFISKDGTFLSLPMALTWSSSSSAAPLSLNPMGMRSIKSLQLHSHSSNHHFQNPLILSSLWRHIYSDHQIHRNGEGVESASFVGSDKDQIAVTGEGIDSVELTTLLRKGVGYTELVSVGPVEEKKPEAKETKATQNQRNPIPVAAAAAAAFHPPSPVLFLYSGILNRAFISRDEMAKQKIVVKVAMHTEKKARKALQTVVSFCGVESAAFEGADKDQIAVIGEGIDSVKLTAKLRKCVGHTDLVSVGAEEEKKKEEEKKKKDECEAFMEYCPYPYPYPYYYGCYGTTPAPHTAASCSLSWLLEFVPSGRSSFRSPLPNPSLTLYLRCCLNWNWNWNWNMRFEVLEGCWGSGETGVESAALIGSDKNQIKVTGEGIDSVELATLLRKGVGCTELVSVGPVEEKKPAVTAAAAASQTPATVVPLQVYPHHYSCYGGPYYHVYESCSNDDPSCGSNFHNRLLSQQNIVVKVAMINDKKTRKALKIAVGVCGVESAALIGSDKDQIKVTGEGIDSVELARLLRKGVGCTELVSVGPVEEKKPAVTAAAATQTPAKVVPATVVPLQVYPHHYSCYGGPYYHQNIVVKVSMNNDKKTRKALKIVVGVSGVESVALFGSNKDQIKVTGEGIDSVKLATLLRRGVGCTELVSVGQAEEKKPANTTTTAAASVESAALIGSDKNQIKVTGEGIDSVKLATLLRKGVGCTELVSVGPVEEKKPAVTAAAAASQTPATVVPLQVYPHHYSCYGGPYYHVYESCSNDDPSCGSNFHNRLLSQQNIVVKVAMINDKKTRKALKIAVGVCGVESAALIGSDKDQIKVTGEGIDSVELARLLRKGVGCTELVSVGPVEEKKPAVTAAAATQTPAKVVPATVVPLQVYPHHYSCYGGPYYHVYEISRKEASPLMAFTSSSGPPLYTWIPLQILPSLNLLLHPALPLLSHFYSKPTYPDHHQLHLDMAKQNIVVKVSMNNDKKTRKALKIVVGVSGVESVALFGSDKDQIKVTGEGIDSVELAMLLRKGVGCTELVSVGQVEEKKPATTTTTAAAASQTPATVVPLQVYPHHYSCYGGPAEASPDPLMAFTSSSGPPLYTWIPLQILPSLNLLQNIVVKVSMNNDKKTRKALKIAVGVSGVESVALFGSDKDQIKVTGEGIDSVELAMLLRKGVGCTDLVSVGQVEEKKPATTTSTTAAASQTPATVVPLQVYPHYYSCYGGPYHRSVGFNSIQFNFSILQQKIVVKVSMNNSKRTRKALQIAVGVSGVESASLMGGSEITVTGDGIDSVRLVMLLRKSVGYTELVSVGPVEDKTPAATATATAIDDATGQQEEKMVAMPWDDCPHDHFISYGTPYHVHVYESTYNHPSCTIM | 1910 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g01962 | 1910 | PANTHER | OS04G0464100 PROTEIN | 204 | 290 | IPR044296 | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 1775 | 1850 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 1205 | 1265 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 319 | 398 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 897 | 956 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 38 | 117 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 727 | 806 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 603 | 678 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 199 | 278 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 1128 | 1204 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 1013 | 1090 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 1322 | 1399 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 1503 | 1581 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 444 | 522 | - | - | |
| Ccar2g01962 | 1910 | Gene3D | - | 1648 | 1725 | - | - | |
| Ccar2g01962 | 1910 | Coils | Coil | 799 | 819 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g01962 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr17:734417 | Ccar2g01962 | Ccar-Chr2:66264613 | dispersed | |
| Ccar | Ccar-Chr2:66264613 | Ccar2g01965 | Ccar-Chr2:66397875 | dispersed | |
| Ccar | Ccar-Chr2:66264613 | Ccar2g01964 | Ccar-Chr2:66380163 | proximal |