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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01965 ATGGCGAAGCAAAAGATTGTGGTGAAGGTGATGATGAAGAACCACAAGTCGCTTCGCAAGGCTTTGCAGATCTCCGCCAGTGTTTGCGGGGTGGAATCAGTGACGCTGCTGGATAAAGAACGGATAGCGGTGACCGGAGAACAAATTGACTCAGTTCAACTAACGTGTTCGCTAAGAAAAAGAGTAGGGCACACAGATCTAGTAAGTGTTGGTCCGGTAGAGGAGAAGAAAACCGTCAAACCGATCTCCATCCCCGAAATAGTGCGGTATGAGTACGTTTATCCTGAACACCACTGCTGGCATACCGCGCCAATGCCATTACTGGCTGTCCATGAATTCCCTTCCAACATTTGCAGCATCTTGTGA 366 48.63 MAKQKIVVKVMMKNHKSLRKALQISASVCGVESVTLLDKERIAVTGEQIDSVQLTCSLRKRVGHTDLVSVGPVEEKKTVKPISIPEIVRYEYVYPEHHCWHTAPMPLLAVHEFPSNICSIL 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01965 121 Gene3D - 1 76 - -
Ccar2g01965 121 PANTHER OS04G0464100 PROTEIN 4 80 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01965 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:66264613 Ccar2g01965 Ccar-Chr2:66397875 dispersed
Ccar Ccar-Chr2:66380163 Ccar2g01965 Ccar-Chr2:66397875 tandem