AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01968 ATGGATTGGACAGAAAAGCAAGAATGTGTATTATGTTGTAGAGGAGGCAAGCTCTTGGTCTGTAATGGTGATGGCTGCCCTATATCTGTCCATAAAGATTGCATGGGTTGCGAAGCTTATGTGGATGACGCTGGCAACTTTCACTGTCCTTACTGTGTTTACAGACAACTCACAGCAGAAGCTTGTCAACTAAGGGAGAAGGCTATGTTGGCAAAGAAAGCTTTGTCAACTTTCTTAGAGGAACAAATGAGAGATGGCAATCACCAAGAGCCAATAGTTGGGTTGGCTAATAAAGATAAACAGATCTTATCAGAAGACAAAGTTTGCTCGGTGGATGGGAACAAACTGGTTTGTGATGATGTTCAAAATCAACGTATCAATTTAGAGAAACATCAGAACTCTAAAACCCCTTTACCGTGTGAAGAAACTCATGACACCTTCGTATCCGAACAAACTGATGAGTTTTCTAACAGGCATGGAGAGGTTCCTGGGATTAATAATGTTAATTCTTGTAGGGTGATGGTTGTTTACAAACCAAACTCGAATCTTATCGATGCATGTGATCTTGATTGTATTTCACGTAAACAAGATAGGATGAGAGCTGACCAATTTAAGTCAGGTGTTAGCAAAAGGATCAAAGTTGACAATCGAACCAGAAATGCTAAGCGCAAATTTGATGGAGTTGTTGACAATCAACAGCATACTACTTCCATAGAAGAAGCAGCAGAGCCAAAAGATGCATGCATTTCATCATCCACAAAGAAGGAAATTGCTCACCAAAAACGAAAGCCTTTTGCAGCATTCAACAAGAATGGAGACAGTAGAAAAGAAGAATGCATGATAGAACAGGCAGCAGAAACATTGCTATCCTTACCAAATGGTATGCACTTGCACTCAAAATCTAATAGCAAGATCAATAATGATTACTCAGACAGTAACATTTTCTTGAAAGATCGTAGTCGTTCAAGACATGGACCAACCCATTTGTTAGATCATCCAAATGGTGCGACAAAGGGATCTTTAGAAGCCAAGACTGGTGTGATGAGTCATACAGAAAGCATTAACGTCAGCAATCGAGGAGTGCTTAAAGATTCTTCTAAGCAGCAGTTAGTAATCGACAGGAGTATGAGACATAGAGCACAATGGAGTGAAGAAGAAGAAGAGATGCTTAAGGAAGGAGTTCAAAAATTCTCACTATTAACACGCAAAAACCTCCCTTGGAAGAAAATATTGGAGTTTGGGCGTCATGTATTTGATGCATCTCGCAATCCTTCTGACCTAAAGGATAAATGGAGGAATATGGCGAAATAG 1311 39.82 MDWTEKQECVLCCRGGKLLVCNGDGCPISVHKDCMGCEAYVDDAGNFHCPYCVYRQLTAEACQLREKAMLAKKALSTFLEEQMRDGNHQEPIVGLANKDKQILSEDKVCSVDGNKLVCDDVQNQRINLEKHQNSKTPLPCEETHDTFVSEQTDEFSNRHGEVPGINNVNSCRVMVVYKPNSNLIDACDLDCISRKQDRMRADQFKSGVSKRIKVDNRTRNAKRKFDGVVDNQQHTTSIEEAAEPKDACISSSTKKEIAHQKRKPFAAFNKNGDSRKEECMIEQAAETLLSLPNGMHLHSKSNSKINNDYSDSNIFLKDRSRSRHGPTHLLDHPNGATKGSLEAKTGVMSHTESINVSNRGVLKDSSKQQLVIDRSMRHRAQWSEEEEEMLKEGVQKFSLLTRKNLPWKKILEFGRHVFDASRNPSDLKDKWRNMAK 436
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01968 436 PANTHER RING-FYVE-PHD ZINC FINGER SUPERFAMILY PROTEIN 2 436 - -
Ccar2g01968 436 Gene3D Zinc-RING finger domain, C3HC4 (zinc finger) 2 91 IPR013083 -
Ccar2g01968 436 Gene3D - 373 436 - -
Ccar2g01968 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 374 436 IPR017930 -
Ccar2g01968 436 SUPERFAMILY Homeodomain-like 378 435 IPR009057 -
Ccar2g01968 436 ProSitePatterns Zinc finger PHD-type signature. 9 52 IPR019786 -
Ccar2g01968 436 ProSiteProfiles Myb-like domain profile. 374 435 IPR001005 -
Ccar2g01968 436 CDD SANT-TRF 382 436 - -
Ccar2g01968 436 SUPERFAMILY FYVE-PHD zinc finger 5 64 IPR011011 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01968 - -