AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g01975 | ATGATAGCACTACCACAAACTCTCACAATCACAATCTCCTCTTCCCTCCTCTCTACGCAATTCCATATATACCCAAAAGTAATTAAAACCTGCAAATCTTTGTGTTCAACAATGGCGGACAAGCGAGAAAAGAGTACTACAGCAAGTTCTCAAATCATCACAGGATCATGTGAAGAAGGTGGTGAAGGAAGTTCCGGCATCCGCACGGTGGAGACGCTGCTGAGGCTGCTTCCGGTGGGGCTTTGTGTGGCCGCGTTAGTTGTCATGCTTAAAGATTCTGAAACTAATGAATACGGCTCTCTTTCATACTCCAACCTCACTGCTTTCAGGTTTTTGGTGCATGCTAATGGCATCTGTGCTGGTTATTCGCTACTGTCGGCTGCTTTCACTGCAATCCCTCGCCCTATAACCATGCCTCGAGCTTGGACCTTCTTCCTCCTTGATCAGGTTTTAACATACCTGATACTGGCCGCCGGTGCGGTGGCGACGGAGGTGGCGTTTCTAACATACAAAGGAGATGTGGCGGTGACTTGGAGCGAGGTGTGTGGAACTTACGGCGACTTCTGTAGAAAGGCGACGGCTTCCATCATCATCACCTTCGTGGTGGTGATCTGCTACGTTTTGCTGTCGCTAATCTCATCTTACAGGCTCTTCAGCAAGTATGATGCACCAGTTGGGTACAAAAATAAGGGGATAGAGATCGTTGATTTTGGAAATTAG | 720 | 47.78 | MIALPQTLTITISSSLLSTQFHIYPKVIKTCKSLCSTMADKREKSTTASSQIITGSCEEGGEGSSGIRTVETLLRLLPVGLCVAALVVMLKDSETNEYGSLSYSNLTAFRFLVHANGICAGYSLLSAAFTAIPRPITMPRAWTFFLLDQVLTYLILAAGAVATEVAFLTYKGDVAVTWSEVCGTYGDFCRKATASIIITFVVVICYVLLSLISSYRLFSKYDAPVGYKNKGIEIVDFGN | 239 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g01975 | 239 | PANTHER | CASP-LIKE PROTEIN 4A4 | 58 | 219 | - | - | |
| Ccar2g01975 | 239 | Pfam | Casparian strip membrane protein domain | 65 | 205 | IPR006702 | - | |
| Ccar2g01975 | 239 | NCBIfam | plant integral membrane protein TIGR01569 | 74 | 215 | IPR006459 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g01975 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr2:66503268 | Ccar6g00586 | Ccar-Chr6:16645199 | dispersed |