AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01988 ATGGGGAATAAACTGGGTAGGAGGCGACAGCTAGTGGACGACAAGTATACAAGGCCTCAAGGGTTATATCAACACAAAGACGTAGATCACAAGAAGCTTCGTAAGCTTATACTCGATTCCAAGCTCGCTCCTTGCTATCCTGGAGACGATGACTGCAGTTGCGATCTTGAAGAATGCCCAATTTGCTTCTTGATCAAGATGTTGCACCAAAGGCATTTGTACCGAGTGTTTCCTGCAGATGAAGACCCCCAATTCTACTCGTCCCACGCAGTATCCTTGTTGGTGTATGATTTTCAAATTTTCATTGTTGTTGATCTTGTTAGTGTTCCAAATTATGTGGTTCGTGTTTTCAATTTCTTAACGATACTTAGGTGTCCCTTTTGTAAAACATTGAATTACGCTGTGGAGTATAGAGGCATGAAGACGAAAGAGGAAAAGGGGCAGGAGCAAATCGAAGAACAAAGGGTGATAGAAGCAAAAATAAGAATGAGACAGCAAGAAATTCAAGATGAAGAGGAAAGAATGCTAAAAAGGCAAGATATGAGCTCTTCTAGCAGGATAATTGAACCAAGTGAGGCTGAGTATTTCTCCAGAGCAGTGACATCTTCTTCTGAAGGTGAGGAAATTGTTTCCGTTCCACAGCAGGGTGCCACAACAGTTAGACATCCTCAACGCTTGAGGGAGAATAGAGAGGATGAGTTTGATCTTGATCCAGAGAACATAATGCTTATGGAAGCCATCTGGTTATCATATCAGGAGGATGGGAAGCACCAACACCATAGCTCTAATTATGGTGATGCTGCCCAATTAGCAAAATACGCAACAGAAGTTCGTGTTTTGGCATCCATGGCCCCACAGGCTGCAGAATCGTCATCTTCAACCTCATCACCTTCTGGTGGTCTTGCATGTGCTATCGCCGCCCTTGCTGAACGCCAGCAAATGGGAGGAGAATCGTCCACTAATTACAACAGTTACGGTGGGAATATATCAACATACAACGTGCAGCATCCAACAGGGTTATCACTTGATAACCATCTGGGAATAAGATCAGAGGGAGAATGGGTGCAAGATTCTTCAGCGATGGGTGAAAATGCATATGGGTATGATAATTCGAACGCAATAGATGATGATGGAAGCAGATACGGGCAACAAGATGATGAGGAGGAGATGGAGAATGGTTTCGGAGGAACCATAGTTGTTCCTGAGAGCTTTGAAGAGCAGATGATGCTAGCCATGGCTGTGTCGCTGGCAGAGGCTCGAGCTAGGACTAGTACACCAGAGGTTGCATGGATTTAA 1296 44.37 MGNKLGRRRQLVDDKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLIKMLHQRHLYRVFPADEDPQFYSSHAVSLLVYDFQIFIVVDLVSVPNYVVRVFNFLTILRCPFCKTLNYAVEYRGMKTKEEKGQEQIEEQRVIEAKIRMRQQEIQDEEERMLKRQDMSSSSRIIEPSEAEYFSRAVTSSSEGEEIVSVPQQGATTVRHPQRLRENREDEFDLDPENIMLMEAIWLSYQEDGKHQHHSSNYGDAAQLAKYATEVRVLASMAPQAAESSSSTSSPSGGLACAIAALAERQQMGGESSTNYNSYGGNISTYNVQHPTGLSLDNHLGIRSEGEWVQDSSAMGENAYGYDNSNAIDDDGSRYGQQDDEEEMENGFGGTIVVPESFEEQMMLAMAVSLAEARARTSTPEVAWI 431
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01988 431 PANTHER PROTEIN SIP5 124 320 IPR039301 GO:0005737(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01988 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
38867 Ccar2g01988 Ccar8g00864
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:66702297 Ccar8g00864 Ccar-Chr8:22375922 wgd