Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g01989 | ATCATAGAACTGCAAGTACATGTAGATTGTGCCGGCTGTGAGAACAAGATCCGAAAATCTCTTCAAAAACTCAAAGGGGTGGAGAACGTAGAAATAGACATGGGGTTACAGAAGGTGACGGTGACGGGATATGCCGACGAGAAAAAGGTGTTGAAGACAGTGAGAAAAACCGGCCGGCGAGCTGAGATCTGGAACGTACCCTACAATCCCGACATCCGCAGCCATAATTACAACGTTAATCAGTATGCTCAACAACAACAACAACAACAGAATGGTAATGGTGGTTCCGGCACCGGTGGCCCCACAGCGACGTTCTATACACGGCAGCCATCTTCGTCGTCATCGTACAACTACTACAAGCATGGTTACGATAACCACCAGAGTTATAACCCGATCCAGTCTTCCGGTTTAATTGGACACCAGACCGGTGCTGCCTTTAGTGATGAAAATACCAATGCTGCCTGTAACATCATGTAG | 477 | 47.38 | IIELQVHVDCAGCENKIRKSLQKLKGVENVEIDMGLQKVTVTGYADEKKVLKTVRKTGRRAEIWNVPYNPDIRSHNYNVNQYAQQQQQQQNGNGGSGTGGPTATFYTRQPSSSSSYNYYKHGYDNHQSYNPIQSSGLIGHQTGAAFSDENTNAACNIM | 158 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g01989 | 158 | Pfam | Heavy-metal-associated domain | 6 | 59 | IPR006121 | GO:0046872(InterPro) | |
| Ccar2g01989 | 158 | CDD | HMA | 3 | 62 | IPR006121 | GO:0046872(InterPro) | |
| Ccar2g01989 | 158 | SUPERFAMILY | HMA, heavy metal-associated domain | 5 | 65 | IPR036163 | GO:0046872(InterPro) | |
| Ccar2g01989 | 158 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 62 | IPR006121 | GO:0046872(InterPro) | |
| Ccar2g01989 | 158 | PANTHER | COPPER TRANSPORT PROTEIN ATOX1-RELATED | 2 | 158 | IPR045181 | GO:0046872(InterPro) | |
| Ccar2g01989 | 158 | MobiDBLite | consensus disorder prediction | 83 | 111 | - | - | |
| Ccar2g01989 | 158 | Gene3D | - | 1 | 63 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g01989 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr12:30915863 | Ccar2g01989 | Ccar-Chr2:66707125 | dispersed | |
| Ccar | Ccar-Chr15:18828632 | Ccar2g01989 | Ccar-Chr2:66707125 | dispersed | |
| Ccar | Ccar-Chr2:66707125 | Ccar13g01071 | Ccar-Chr13:15618576 | dispersed | |
| Ccar | Ccar-Chr2:66707125 | Ccar13g00373 | Ccar-Chr13:4649846 | transposed |