AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01993 ATGGCAGAGAGAAAGGTGTTGAATAAGTATTATCCGCCGGATTTTGATCCGGCAAAAATTCCAAGGAGGCGTATGCCCAAGAATCAACAAATAAAAGTTAGAATGATGCTTCCGATGAGCATTCGCTGCAGCACATGTGGAAACTACATTTACAAGGGTACCAAGTTCAATTCACGTAAGGAAGACGTTATTGGAGAGACATATCTTGGGATTCAAATATTCAGGTTCTATTTTAAGTGCACCAAGTGCTCAGCTGAGATTACCATGAAGACAGACCCACAAAACTCTGATTATGTTGTTGAGTCTGGAGCTGCGAGAAATTTTGAGCCTTGGCGTGCAGAGGATGAGTCAAGGCATGCAAGTGTAAGCGTAGATGCAATGCTTGAAGCCTTGCAGCGATCAGCTCCGGTACAGGAGGACAAGCTTGAAGAAGAGGATGAAGCCCTTATAAAATCCATCTTCCAAGGATCAAAAGAGATTATCCATAGAATTGATGATGATGAGCTTGAAGATGACGATGCACAAGTTAGTTCTAAGAAGCAGAAAGTTACTGAAGATCGTCCGACAGATTACTTGACGAAAACCAGTACCATTAAGAGAGAAGATGAAAAGGGTGGTGGAAGGATTGGTCTCAAGTCTTCAACTGTTAAGTTCTCTGTGGTGAAGAAGGCATCATCAGATGGTGGTAATGGTAAAACAGAAGCAAATGAGCAAGAGAAGCCCAAAATTACAACTAGTAGTGGGCTACAATCTTTATGCCAACAGTATGATACTACTGATGATGAAGAAGAGTAA 795 41.64 MAERKVLNKYYPPDFDPAKIPRRRMPKNQQIKVRMMLPMSIRCSTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAEITMKTDPQNSDYVVESGAARNFEPWRAEDESRHASVSVDAMLEALQRSAPVQEDKLEEEDEALIKSIFQGSKEIIHRIDDDELEDDDAQVSSKKQKVTEDRPTDYLTKTSTIKREDEKGGGRIGLKSSTVKFSVVKKASSDGGNGKTEANEQEKPKITTSSGLQSLCQQYDTTDDEEE 264
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01993 264 Hamap Splicing factor YJU2 [YJU2]. 1 260 IPR043701 GO:0000398(InterPro)
Ccar2g01993 264 MobiDBLite consensus disorder prediction 240 256 - -
Ccar2g01993 264 MobiDBLite consensus disorder prediction 165 264 - -
Ccar2g01993 264 MobiDBLite consensus disorder prediction 173 208 - -
Ccar2g01993 264 PANTHER SPLICING FACTOR YJU2 114 225 IPR007590 GO:0000398(InterPro)|GO:0008380(PANTHER)|GO:0071006(PANTHER)
Ccar2g01993 264 Pfam Saf4-Yju2 protein 9 117 IPR007590 GO:0000398(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01993 - -