AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01998 ATGGTTGGAGGTGGAGGAATAGGAATTGGAGCAACTCCCAGATCAGTTTCGCTTTTGCCCCACAACAGATTTCGACCCCCAAATTCAAATCCAATTCCTAGAAATAGAACCCATTTTCTAGAAAGAAATAGAATTCCACCCACCAAGTTATCTGTCCACAAGTTTTCCCCTATCCGCATCCCTTCCTTCTCCATTAAAGCTACTGCTTCTTCAGTAGGAAATACAGAATATGTGGAGGAGCCTGCTACAAATGTGAAATTTCAATCATCTTTGAGTCTTCCTGGTTGCCCAAGTTCATTATCTTTGATTGGAACAGAGAAATCATTACAGATAGTTCTAGTCAGAGATGTTGATGGCAAAACTTTCTGGGATGCTCTAGATGAAGCCATCTCCCCAAGAATCAAATCACCCCAAGTTGATGAAACTGCCCTCTCCACATTCCGTGGGATCTTTCAAAATCGGCCATTAAAGAAAGGAACTTCCATATTCTTGACTTGGCTTCACCCCTCCAAAATGCTAGTTCACTTATCAGCCGAAGGGATTCCATCGGCTGCAGATGCCACAATCCAATCAGAAAATGTGACAATCTCCCTCTTTGACGTATTTTTTGGCCGTGGCCCTGTTTCTCCTTCCTTAAAAGCTTCAGTTAGCAACTGTTTGGCTTCAATTCTCAGATAA 678 42.48 MVGGGGIGIGATPRSVSLLPHNRFRPPNSNPIPRNRTHFLERNRIPPTKLSVHKFSPIRIPSFSIKATASSVGNTEYVEEPATNVKFQSSLSLPGCPSSLSLIGTEKSLQIVLVRDVDGKTFWDALDEAISPRIKSPQVDETALSTFRGIFQNRPLKKGTSIFLTWLHPSKMLVHLSAEGIPSAADATIQSENVTISLFDVFFGRGPVSPSLKASVSNCLASILR 225
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01998 225 Gene3D - 203 218 IPR016089 -
Ccar2g01998 225 MobiDBLite consensus disorder prediction 1 36 - -
Ccar2g01998 225 SUPERFAMILY Chalcone isomerase 77 224 IPR036298 GO:0016872(InterPro)
Ccar2g01998 225 Gene3D - 105 202 IPR016088 -
Ccar2g01998 225 Pfam Chalcone-flavanone isomerase 106 221 IPR016087 -
Ccar2g01998 225 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 61 105 - GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
Ccar2g01998 225 MobiDBLite consensus disorder prediction 22 36 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01998 - -