Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g02002 | ATGGCTTCCCATTCTTTCACACCCAGCAATTTAAGTCTCCGCCTTCACTATTCCACCAAACCCACATTCAATTCGGGTCTCATATCATCAAATCGGTTTCTATTAACGATACCCACAACCCGATTTTCTCCATCAATTCGCTCCATGGGTTCTTCGTCTTCTTCATCGCAGAAACCAGACGCCACAGCTCAAGATTCGATGTTTGATCAATTTGCAGAAGCGGGGAAGATGGATTATAAATCTGTTAGTGATCAAGAATGGAAGAAGAAACTCACTGGGGATCAGTTTTATGTAACTCGACAAAAAGGAACAGAAAGGGCATTCACTGGGGAATACTGGAACACGAAAACCAAGGGAACGTACCATTGCATTTGTTGCGATACTCCACTGTTCGAGTCGTCCACAAAGTTCGATAGCGGAACTGGTTGGCCATCGTACTATGAGCCAATAGGAAGTAACGTGAAGTCGAAGCTAGACCTATCGATCATCTTCATGCCTCGACAGGAAGTTGTGTGTGCAGTTTGTGATGCTCATCTTGGTCATGTCTTTGATGATGGTCCTCCACCCACCGGGAAACGTTATTGCATCAATAGTGTTTCCCTGAAGATGAAGGCCAACTAG | 621 | 44.77 | MASHSFTPSNLSLRLHYSTKPTFNSGLISSNRFLLTIPTTRFSPSIRSMGSSSSSSQKPDATAQDSMFDQFAEAGKMDYKSVSDQEWKKKLTGDQFYVTRQKGTERAFTGEYWNTKTKGTYHCICCDTPLFESSTKFDSGTGWPSYYEPIGSNVKSKLDLSIIFMPRQEVVCAVCDAHLGHVFDDGPPPTGKRYCINSVSLKMKAN | 206 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g02002 | 206 | Pfam | SelR domain | 86 | 204 | IPR002579 | GO:0033743(InterPro) | |
| Ccar2g02002 | 206 | ProSiteProfiles | Methionine-R-sulfoxide reductase (MsrB) domain profile. | 84 | 206 | IPR002579 | GO:0033743(InterPro) | |
| Ccar2g02002 | 206 | MobiDBLite | consensus disorder prediction | 45 | 64 | - | - | |
| Ccar2g02002 | 206 | NCBIfam | peptide-methionine (R)-S-oxide reductase MsrB | 82 | 203 | IPR002579 | GO:0033743(InterPro) | |
| Ccar2g02002 | 206 | FunFam | Peptide methionine sulfoxide reductase MsrB | 76 | 206 | - | - | |
| Ccar2g02002 | 206 | Gene3D | Peptide methionine sulfoxide reductase. | 74 | 206 | - | - | |
| Ccar2g02002 | 206 | PANTHER | METHIONINE SULFOXIDE REDUCTASE | 46 | 204 | IPR028427 | GO:0005737(PANTHER)|GO:0006979(InterPro)|GO:0016671(InterPro)|GO:0030091(InterPro)|GO:0033743(PANTHER) | |
| Ccar2g02002 | 206 | SUPERFAMILY | Mss4-like | 82 | 204 | IPR011057 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g02002 | K07305 | peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr2:62070577 | Ccar2g02002 | Ccar-Chr2:66910828 | dispersed |