AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02004 ATGTACGAAATACGGGAGACTCAAAGCACTTCCTCCCTTCTCTTCAGGGCTCAGATGTCTGGGAGGAACCGTGGACCTCCGCTTCCGATGAAAGGTGCTCCTCATGCTGGAGTGCCACCCATTTACGAGCCTCCATTTGTAAGGAATCTAGGTCCAATGCCCCATCATGCGTTGCTAGAAGAGATGAGGGAAGCTCAGTTCGGGATGGGTCCCAGACAACTCCCTCCTCACCCTGCTATTATTGAGGAGCGGTTTGCAGCTCAACATCAGGACATTCAGGGGCTTTTGGTTGATAATCAGCGTCTAGCTGCAACTCATGTTGCACTTAAGCAGGAACTGGAAGCTGCACAACACGAGCTTCAACAAACAGATCGCTTTGCTCGCAACTTTCTTATGGAGAAGGATATGCAGATGAGGGAGTTGTATGAGAAATCAGCCAAAATGGAACATGATCTTCATGGAGTGGAAAGCATGCGGGCTGAGCTTATGCAATTTCATGCTGATATTAAGGAATTGACTGCCACACGTCAGAAGCTTACCGCTCAGGTTCAGGCGATGACCCAGGATCTTGCCAGAGCTAATGCTGACTTGCAGCAAGTTCCTGCACTCAAGTCAGAAATTGAAGGGCTTAGACAGGAATTGCAACATGCGAGGGCTGCAATTGAGCATGAGAAGAAGGGGCATGCAGAGAACTATGAGCATGGTCAAGTGATGGAGAAGAATTTACTCTCTATGGCCCGTGAGCTGGAAAAGCTGCGTGCCGAGATGGCTAATGCTGAAAAAAGGGCTCGTGCTGCTGCAGCGGTAGGGAATCCAAATCCAGGCTACAACACAAATTATGGCAATGCTGAAGCTAACTATGCAGGGAATTCTTACCCTGCAAGTTATGGCATGAGTTCTATGAATCAAATGAATCCTGTGCAGCCTGGTGCAGAAGGTTATCCTCAGTATGGACCTGGACCTGGTTCTTGGGGATCGTATTCAATTTTGGCTGTGGCAAAACAAGACTCTCCTGGATTGGCCTCGACAAAGGGAACCTTGAAAGGTACCAGCACAGGAGTCAAATCTTTAGAGGAAGAGTGGAATATTTTGCCAAAAAGGGTATATGACGTCATCCTATGGAGTGTGTGGGTCCCTCAGTTTGAGCTCGAATGTTGA 1158 48.27 MYEIRETQSTSSLLFRAQMSGRNRGPPLPMKGAPHAGVPPIYEPPFVRNLGPMPHHALLEEMREAQFGMGPRQLPPHPAIIEERFAAQHQDIQGLLVDNQRLAATHVALKQELEAAQHELQQTDRFARNFLMEKDMQMRELYEKSAKMEHDLHGVESMRAELMQFHADIKELTATRQKLTAQVQAMTQDLARANADLQQVPALKSEIEGLRQELQHARAAIEHEKKGHAENYEHGQVMEKNLLSMARELEKLRAEMANAEKRARAAAAVGNPNPGYNTNYGNAEANYAGNSYPASYGMSSMNQMNPVQPGAEGYPQYGPGPGSWGSYSILAVAKQDSPGLASTKGTLKGTSTGVKSLEEEWNILPKRVYDVILWSVWVPQFELEC 385
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02004 385 Coils Coil 200 227 - -
Ccar2g02004 385 Coils Coil 99 119 - -
Ccar2g02004 385 Coils Coil 155 196 - -
Ccar2g02004 385 PANTHER PROTEIN FLX-LIKE 2 19 311 IPR040353 -
Ccar2g02004 385 Coils Coil 235 269 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02004 K27811 protein FLX/FLXL
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:66918740 Ccar4g00888 Ccar-Chr4:19609022 dispersed
Ccar Ccar-Chr2:66918740 Ccar9g00957 Ccar-Chr9:17727895 transposed