Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g02021 | ATGTGGAACTACATATGGATTCTTTTTTTGATTTATCTTCTGATAGAAATCAGCTTTGCTAAGGCTGCTTCTGTTGATGATGGATTGACTTCCACGTGTCCTGCGCTTGACCCCAGGCTGAATTACCGTCCGATAATCGGAATTCTCAGCCATCCAGGAGATGGTGCCTCCGGTCAACTTAGTAATGCGACTGATGCTTCGTATATTGCTGCATCGTATGTGAAGTTTGTTGAATCTGCCGGTGCTAGGGTTATTCCTCTCATCTATAACGAACCTCCTGAGGTTCTCCAGAGTAAACTCAATCTGGTCAATGGAGTGCTTTTTACCGGTGGATGGTCTAAGGCTGGCCTATACTTTGATGTTGTTGAGGGAATTTTTAATCAAGTCCTGAAGAAGAATGATGCAGGTGACCATTTCCCATTGCTTGCAATATGCTTAGGTTTTGAACTCCTAACGATGGTTATTAGCAAAAACAATAATATCCTTGAAGCCTTCAGTGCATCAAATCAAGCGTCTACGCTCCAATTCATGAAGAATGTAAATATTGAAGGAACTCTGTTTCAAAGATTTGCTCCTGAGCTGATTGCGAAGTTGAGCACAGAATGCCTTGTGATGCAAAACCATAAATTTGGCATATCGCCAGAAACATTTCAAGGGAACATGGAACTGTGCAGCTTCTTCAAGATCTTAACAACTAGTAGGGATGAAAATAACAAGGTATATGTATCAACAGTTCAATCAGAAAGCTATCCAGTAACTGCTGTCCAGTGGCACCCAGAGAAAAATGCTTTTGAGTGGGGATTGTCGATGATTCCACATTCAGATGATGCAATTCAAGTGACTCAACACGTTGCCAACTTTTTCGTAAGTGAGGCTAGAAAATCCTTCAACAACCCCCCTGCTAAGGAAGTGCTGGACAACGTTATTTACAATTACAGCCCCACTTATCGTGGGAAGGAGGGGAAGGGATATGACGAGGTTTACATCTTCACCGAAAAGGCTGCTCCATTTCATTATAAAATGTGA | 1026 | 42.01 | MWNYIWILFLIYLLIEISFAKAASVDDGLTSTCPALDPRLNYRPIIGILSHPGDGASGQLSNATDASYIAASYVKFVESAGARVIPLIYNEPPEVLQSKLNLVNGVLFTGGWSKAGLYFDVVEGIFNQVLKKNDAGDHFPLLAICLGFELLTMVISKNNNILEAFSASNQASTLQFMKNVNIEGTLFQRFAPELIAKLSTECLVMQNHKFGISPETFQGNMELCSFFKILTTSRDENNKVYVSTVQSESYPVTAVQWHPEKNAFEWGLSMIPHSDDAIQVTQHVANFFVSEARKSFNNPPAKEVLDNVIYNYSPTYRGKEGKGYDEVYIFTEKAAPFHYKM | 341 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g02021 | 341 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 59 | 277 | - | - | |
| Ccar2g02021 | 341 | Pfam | Peptidase C26 | 44 | 260 | IPR011697 | GO:0016787(InterPro) | |
| Ccar2g02021 | 341 | FunFam | Folate gamma-glutamyl hydrolase | 40 | 331 | - | - | |
| Ccar2g02021 | 341 | ProSiteProfiles | Gamma-glutamyl hydrolase domain profile. | 35 | 331 | IPR015527 | GO:0008242(InterPro) | |
| Ccar2g02021 | 341 | PANTHER | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE | 23 | 331 | IPR015527 | GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER) | |
| Ccar2g02021 | 341 | SUPERFAMILY | Class I glutamine amidotransferase-like | 63 | 329 | IPR029062 | - | |
| Ccar2g02021 | 341 | Gene3D | - | 40 | 331 | IPR029062 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g02021 | K01307 | gamma-glutamyl hydrolase [EC:3.4.19.9] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 37985 | Ccar17g00247 | Ccar2g02021 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr6:1758393 | Ccar2g02021 | Ccar-Chr2:67294270 | transposed | |
| Ccar | Ccar-Chr6:3389570 | Ccar2g02021 | Ccar-Chr2:67294270 | transposed | |
| Ccar | Ccar-Chr17:2739746 | Ccar2g02021 | Ccar-Chr2:67294270 | wgd |