Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g02063 | ATGGCTGCTTCTCTCTCGCTTGTCTTCTTCTTCTTCAGCTTCCTGTTTCCATTCTTCTCCATCTCCAACGCCATTGTTCCCGCCGCCGACACCTTCCGATATGTCAACACCGGCGGTTTTGGCCTAGCCGATTCCGAATACGGCCCCAATTACCGCCCTCTTCCTCCTTTCACCGCACCATTCCAGCTCTGTTTCTACAACACCACCCCCAATGCCTACACTCTTAGTCTACGAATGGGTATAACACGTGATAGATCCATCATGCCCTGGGTCTGGGAAGCCAACCGCGGAAAACCCGTTCGTGAMAACGCCACTYTCTCCTTCGGCTCCGACGGSAACCTGGTTYTGGCCGATGTAGACGGYCGGATTGTMTGGCAAACAAACACCGCCAATAAGGGTGTTGTTGGGTTCGAAATACTCTCAAATGGTAACATTGTGCTCCGTAACGCTCAGGGTAATTTCATCTGGCAAAGCTTTGATTCTCCAACCGATACCATCTTGTTCGGCCAGAGTCTCCGGATCGGAGGTCCTACTAAGCTTGTGAGCAGGGCTTCCACGACGGAAAACGTTAACGGGGTGTATAGCTTCGTATTAGAGCCTAAAAGATTGGCTTTGTATTACAAGRCCATGCGTTACTGGTCATCCTCCTTTACCCAAGTGAACAAGGCCAACGGGAATTTGGTTAATGCAACGTTAGAAGTTGGAGAATCTGAATATGTTGATAGCAATTTTAACGCACTCGTGTGTCGTTTCTCCAACTCCGATGCCGGAACTTTTCTAGATCTCAACTTATTGAGATACAACAGCACGTTCTCGTATCTCCGGTTGGGCATCGATGGGAACCTAAGACTGTACAGTTATCGTCGAAATGCCGTTTCAAGTGCTTGGAGCCTGTTATTCACTTTGTTCGATAGAGGGGTGAGTGAGAGGGGGGAGGAAATCGAAGATGATTGCCAATTGCCCGATCGGTGTGGGAAGTTTGGGCTTTGTGAGAACAGCCAATGCGTCGGATGCCCGACACCGAATGGTGTTTCTGCATGGAGCGAAGATTGTGTTGCAAAGGTGGCGGGATGTGAGGCGAGTGGTTTTAGATACTACGAGCTCAAAGGGGTGGACCATTTCACGGTGAAATACAGTGCAGGGATGGGTCGGGTGAATCGGAAGGATTGCGAGAGCAAATGCACGAAGGATTGCAAGTGCTTGGGTATAAATATGCATTGCATGCAATCAATCCAATGCACACCACCATTAACCATGACTGTTCCTTCTGCTTCTCTCTCGCTTATCGTCGTCGTCTTCTTCTTCTGCTTCCTGTTTCCACTCTTCTCCATCTCCGACGCCATTGTTCCCGCTGCAGACACCTTCCGGTATGTCAACAGTGGCGATTTCGGACTATTAGAGACTGAATACAACCCAACCTACCGCTTTCTTCCTCCATTCACCACCCCTTTCCAGCTCTGTTTCTACAACACCACCCCCAACGCCTACACACTTAGTCTACGCATGGGTACCAGACGTGATGGATCCATCATGCCCTGGGTCTGGGAAGCCAACCGAGGCAAACCCGTTCGTGAAAATGCCACTTTCTCCTTTGGGTCCGATGGAAACCTTGTCTTGGCCGACGCAGACGGCCGGATTGTATGGCAGACCAACACCGCCAATAAGGGTGTCGTAGGTTTCGCCATACTCTCAAATGGTAACATGGTGCTTCGTGACGCAAAGGGTAGTTTCATCTGGCAAAGCTTTGATTCCCCAACCGATACCCTCTTGCTCGGCCAAAGTCTCCAGATCGGAGGTCCTAATAAGCTCGTGAGCAGGGCATCCACGACGGAAAACGTTAACGGGGTGTACAGTTTCGTATTAGAGCCCAAAAGAATGGCTTTGTATTACAAGACCATGCTTTACTGGTCCTCCACCTTCACCGAAGTGAATAAAGCCAATGGGAATTTGGTTAAGGCAACGTTGCAAATCGTGGAAACTGAATACGACGATGACTATTTTCATTCACTCAGGTGTCATCTATCTAACTCTAATGAAGTATCTGACCTTAATCTTGACATCATCAGATACAACAGCAACTTATCGTATCTCCGATTGGGCGTCGATGGGAATCTAAGACTCTACACTTATCGTGCCAATGTCCGTGGAAACGCATGGAGCCTGTTATTCACTTTGTTCAAGAGAGGGGTGGCCGAGAGGTGGGCAGAACATGAAGACGAGTGCCAGTTGCCAGAACGGTGCGGGAAGTTTGGGCTTTGCGAGAACAGCCAATGCGTTGGGTGCCCGTCACCGAAAGGGGTGTTTGCATGGAGCAACGACTGCGTTGCAAAGTTGCCGGGATGCCAGGCGAGTAGTTTTCGGTACTACGAGGTTAAAGGGGTGGACCATTTCACGGTGAAATACAGTGCCGGGACGGGTGAGGCGAATCGGAGGGATTGTGAGCGAAAATGCACGAAGGATTGCAAGTGCTTGGGGCGTTCCATGGAAGGCGAGTGCCAGTTACCGGAAAGATGTGGGAAGTTTGGTCTTTGTGAGGATAGCCAGTGTGTGGCKTGCCCAACACCAAATGGGCTAAGTGGGTGGAGTAAAGATTGCGATTCGAAAAAGGTGACAACTTGCAAGAGTGGTGAGTTTGGGTACTATAAGCTCGAAGGGGTTGACCATTTTATGATCAAGTACACCAGGGGAGATGGGCCAATTAAGCAAACCGAGTGCGAGACCAAATGCAGCAAGGATTACACATTCACTTACGTAAACGAAGGTGAATTCGGAGAATATATAGTCGAGTACGATGCCAATTATCGAGCTCTTTCCCCTTTTAGTAACCCTTTCCAACTTTGTTTCTATAACACCACCCCTAATGCATTCACTCTAGCTCTACGTATGGGTACTGTCCGATCCGAATCCCTCATGCGTTGGGTTTGGGAAGCTAACCGTGGCAACCCAGTTCGTGAAAACGCCACCCTCACCTTCGGCACCGACGGAAACCTGGTTCTGGCTGATGCCGACGGCAAGGTTGCATGGCAGACTAACACCGCCAACAAGGGTGTCGTTGGTTTTCAGCTGCTTCCAACTGGTAACATGGTTCTTCATGATGGGAAGGGTAATTTCATATGGCAAAGTTTTGATTCACCAACCGACACTCTYTTGGTGGGTCAATATCTCCGAGCCGGTGGTCCAAGTAAGCTTGTGAGTCGGAGTTCGGAGGTGAACAACGTCGATGGAGCATACAGCTTGGTGATGRAGCCCAAAGGGCGTTCYATGGAAGGCGAGTGCCAGTTACCGGAAAGATGTGGGAAGTTTGGTSTYTGTGAGGATAGCCAGTGTGTGGCTTGCCCAACACCAAATGGGCTAAGTGGGTGGAGTAAAGATTGCGAKTCSMAAAAGGTGACATCTTGCAAGAGTGGTGAGTTTGGGTACTATAAGCTCGAAGGRGTTGACCATTTTATGATCAAGTACACGAGGGGAGATGGGCCAACGAAGCAAACCGACTGCGAGACCAAATGCAGCAAGGATTGA | 3519 | 49.7 | MAASLSLVFFFFSFLFPFFSISNAIVPAADTFRYVNTGGFGLADSEYGPNYRPLPPFTAPFQLCFYNTTPNAYTLSLRMGITRDRSIMPWVWEANRGKPVRXNATXSFGSDGNLVLADVDGRIVWQTNTANKGVVGFEILSNGNIVLRNAQGNFIWQSFDSPTDTILFGQSLRIGGPTKLVSRASTTENVNGVYSFVLEPKRLALYYKXMRYWSSSFTQVNKANGNLVNATLEVGESEYVDSNFNALVCRFSNSDAGTFLDLNLLRYNSTFSYLRLGIDGNLRLYSYRRNAVSSAWSLLFTLFDRGVSERGEEIEDDCQLPDRCGKFGLCENSQCVGCPTPNGVSAWSEDCVAKVAGCEASGFRYYELKGVDHFTVKYSAGMGRVNRKDCESKCTKDCKCLGINMHCMQSIQCTPPLTMTVPSASLSLIVVVFFFCFLFPLFSISDAIVPAADTFRYVNSGDFGLLETEYNPTYRFLPPFTTPFQLCFYNTTPNAYTLSLRMGTRRDGSIMPWVWEANRGKPVRENATFSFGSDGNLVLADADGRIVWQTNTANKGVVGFAILSNGNMVLRDAKGSFIWQSFDSPTDTLLLGQSLQIGGPNKLVSRASTTENVNGVYSFVLEPKRMALYYKTMLYWSSTFTEVNKANGNLVKATLQIVETEYDDDYFHSLRCHLSNSNEVSDLNLDIIRYNSNLSYLRLGVDGNLRLYTYRANVRGNAWSLLFTLFKRGVAERWAEHEDECQLPERCGKFGLCENSQCVGCPSPKGVFAWSNDCVAKLPGCQASSFRYYEVKGVDHFTVKYSAGTGEANRRDCERKCTKDCKCLGRSMEGECQLPERCGKFGLCEDSQCVACPTPNGLSGWSKDCDSKKVTTCKSGEFGYYKLEGVDHFMIKYTRGDGPIKQTECETKCSKDYTFTYVNEGEFGEYIVEYDANYRALSPFSNPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADADGKVAWQTNTANKGVVGFQLLPTGNMVLHDGKGNFIWQSFDSPTDTLLVGQYLRAGGPSKLVSRSSEVNNVDGAYSLVMXPKGRSMEGECQLPERCGKFGXCEDSQCVACPTPNGLSGWSKDCXSXKVTSCKSGEFGYYKLEGVDHFMIKYTRGDGPTKQTDCETKCSKD | 1172 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g02063 | 1172 | Gene3D | - | 923 | 1043 | IPR036426 | - | |
| Ccar2g02063 | 1172 | Gene3D | - | 516 | 640 | IPR036426 | - | |
| Ccar2g02063 | 1172 | Gene3D | - | 93 | 217 | IPR036426 | - | |
| Ccar2g02063 | 1172 | ProSiteProfiles | Bulb-type lectin domain profile. | 449 | 583 | IPR001480 | - | |
| Ccar2g02063 | 1172 | ProSiteProfiles | Bulb-type lectin domain profile. | 42 | 160 | IPR001480 | - | |
| Ccar2g02063 | 1172 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 953 | 1086 | IPR036426 | - | |
| Ccar2g02063 | 1172 | CDD | B-lectin | 468 | 585 | IPR001480 | - | |
| Ccar2g02063 | 1172 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 70 | 214 | IPR036426 | - | |
| Ccar2g02063 | 1172 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 484 | 832 | IPR051343 | - | |
| Ccar2g02063 | 1172 | SMART | blect-4 | 468 | 585 | IPR001480 | - | |
| Ccar2g02063 | 1172 | SMART | blect-4 | 928 | 1045 | IPR001480 | - | |
| Ccar2g02063 | 1172 | SMART | blect-4 | 45 | 162 | IPR001480 | - | |
| Ccar2g02063 | 1172 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 493 | 637 | IPR036426 | - | |
| Ccar2g02063 | 1172 | ProSiteProfiles | Bulb-type lectin domain profile. | 925 | 1043 | IPR001480 | - | |
| Ccar2g02063 | 1172 | CDD | B-lectin | 928 | 1045 | IPR001480 | - | |
| Ccar2g02063 | 1172 | CDD | B-lectin | 45 | 162 | IPR001480 | - | |
| Ccar2g02063 | 1172 | Pfam | D-mannose binding lectin | 91 | 175 | IPR001480 | - | |
| Ccar2g02063 | 1172 | Pfam | D-mannose binding lectin | 514 | 597 | IPR001480 | - | |
| Ccar2g02063 | 1172 | Pfam | D-mannose binding lectin | 974 | 1055 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g02063 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr2:67754952 | Ccar9g00210 | Ccar-Chr9:7019662 | dispersed | |
| Ccar | Ccar-Chr2:67754952 | Ccar9g00204 | Ccar-Chr9:6875684 | transposed |