AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g02064 | ATGGCTAATCGAAATCTGGAGAAATTGGCATCTATTGATGCTCAGTTGAGGCTTTTAGTTCCTGGAAAAGTTTCTGAGGATGATAAGCTTATTGAGTATGATGCTTTGCTTTTGGATAAGTTTCTTGATATCCTTCAAGATTTACATGGGGAGGATCTCAAAGAAACGGTATATGCTAACTTCAATCTTTCTGTTAGTTGTCACATTGAATCCCCGAACCCTAATCGATTTCAGAAAACCCACTTCAATTCAGATGAGTTTTCATCATCATCATTTGCAAGCATATCAGATATAATGAAATTGGTTATCTTAAAAAGCTCACTCTCCAATGTTGTTCAAGAATGTTATGAGCTTTCTGCTGAGTATGAAGGAAAGCGCGATCCGAAAAAGCTGGAGGAGCTTGGAAGTGTGTTAACAAGTTTAGATCCAGGGGACTCCATTGTTATTGCGAAAGCTTTTTCTCACATGCTTAATTTGGCCAATCTGGCTGAAGAGGTTCAGATTGCTTACCGTCGTAGGATTAAACTGAAGAAAGGTGATTTTGCTGATGAAGCCAATGCAACAACTGAATCTGATATCGAAGAAACTCTCAAGAAACTTGTGCATCAACTTGGGAAGTCCCCTGAAGAAGTTTTTGATGCACTCAAGAATCAAACAGTTGATTTGGTCTTGACTGCTCATCCAACTCAATCTGTCCGAAGATCTTTGCTTCAAAAGCATGGAAGGATTCGTGACTGTTTGGCTCAGTTGTATACCAAGGATATCACTCCTGATGATAAACAGGAACTAGATGAGGCTTTGCATAGAGAAATTCAAGCTGCTTTCCGCACAGATGAGATCCGTAGGACTCCTCCAACCCCACAAGATGAAATGAGAGCTGGAATGAGCTACTTCCACGAAACAATCTGGAAGGGTGTTCCTAAATTCTTACGACGTGTGGACACGGCTCTTAAGAACATTGGAATCAATGAACGTGTTCCGTACAATGCCCCTCTTATACAGTTCTCTTCCTGGATGGGCGGTGACCGTGATGGCAATCCGAGGGTAACTCCTGAGGTAACAAGGGACGTTTGCTTACTCGCTAGAATGATGGCTGCAAACATGTACTTTTCCCAGATAGAAGATCTAATGTTTGAGATGTCCATGTGGCGTTGTAACGATGAGCTTCAGTTCTGGAAACAGGTTCCTCCCACGGAACCTTATCGTGTGATTCTTGGTGACGTAAGGGACAGGTTATATAACACACGTGAACGAGCTCGCCATCTTCTCGCCCACGGGAAATCCGACATTCCAGAGGAAGCAGTTTATACCAATGTTGAACAGTTCTTGGAACCTCTTGAGCTATGCTACAGATCTCTTTGCGCTTGTGGTGATGTTGTGATTGCTGATGGAAGCCTTCTCGATTTTCTAAGGCAAGTGTCGACCTTTGGACTGTCGCTTGTGAAACTTGATATACGTCAAGAATCTGATCGCCATACGGACGTCCTCGATGCCATTACTCAACATTTGGAAATTGGGTCTTACCGTGAGTGGTCTGAAGAAAAGCGCCAAGAATGGCTTCTGGCGGAGCTTGGTGGAAAACGGCCTCTTTTTGGTCCGGATCTCCCCAAAACTGAGGAAATAGCGGATGTTTTAGATACCTTAAATGTCTTGGCCGAACTCCCATCGGATTGCTTCGGTGCTTACATCATTTCAATGGCTACAGCAGCTTCCGATGTGCTTGCTGTCGAGCTTCTTCAACGTGAATGCCATGTGAAAAAATCGTTAAGGGTGGTTCCGCTTTTCGAGAAACTGGCCGATCTTGAGGCGGCTCCGGCGGCCATGACTCGACTTTTCTCAATCGACTGGTACAAAAACCGCATCAACGGTAAGCAAGAAGTCATGATCGGATACTCTGATTCGGGAAAAGATGCCGGAAGGCTTTCTGCTGCATGGCAGCTATACAAGGCTCAAGAAGAGCTTATTAAGGTTGCAAAGGAGTTCGGAGTTAAGCTCACCATGTTCCACGGCCGCGGTGGAACCGTTGGGAGAGGAGGCGGACCTACCCATCTCGCCATCCTGTCTCAGCCACCGGAGACCATTCATGGGTCTTTAAGAGTCACGGTTCAGGGTGAGGTCATTGAGCAATCTTTCGGTGAGGAACATTTGTGCTTTAGAACACTCCAACGTTTTTGCGCAGCTACTCTCGAGCACGGGATGAATCCCCCGATCTCACCTCGACCTGAATGGCGTAAACTTATGGACGAGATCGCAGTTTTTGCAACCGAGCATCGGCCATCAAAAAGAAAACCGAGTGGAGGCATAGAATCACTCCGAGCCATTCCATGGATCTTCGCATGGACTCAAACCAGGTTCCATCTCCCCGTTTGGCTCGGCTTCGGGGCTGCATTCAAATATGCCATTCAAAAGGACAGCAAGAATCTAAAAATGCTACAAGAAATGTACAAAACCTGGCCTTTCTTTAGGGTCACCATTGATTTAGTCGAAATGGTGTTCGCTAAAGGAGATCCCGGCATTGCCGCACTGAACGACAAGCTCCTCGTCTCCGAAGATCTATGGTCTTTCGGAGAATCTTTGAGAGCAAACTATGAAGAAACCAAGGATCATCTCCTCAAGATCGCTGGACATAAGGACCTTCTCGAGGGCGATCCTTACTTGAAACAAAGACTTCGTCTGCGTGATTCATATATCACTACCTTGAACGTATGCCAAGCTTACACGCTAAAACGAATTCGTGATCCAAACTATCATGTGACATTGAGGCCTCATATCTCGAAAGAGTATTCTGAGCCAAGCAAACCGGCCGATGAACTGATCACCCTGAACCCGACCAGCGAGTATGCACCAGGTCTGGAGGACACCCTGATCCTGACCATGAAGGGCATTGCTGCCGGTATGCAGAACACCGGTTAA | 2913 | 45.79 | MANRNLEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEDLKETVYANFNLSVSCHIESPNPNRFQKTHFNSDEFSSSSFASISDIMKLVILKSSLSNVVQECYELSAEYEGKRDPKKLEELGSVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIKLKKGDFADEANATTESDIEETLKKLVHQLGKSPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRDCLAQLYTKDITPDDKQELDEALHREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFEMSMWRCNDELQFWKQVPPTEPYRVILGDVRDRLYNTRERARHLLAHGKSDIPEEAVYTNVEQFLEPLELCYRSLCACGDVVIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVLDAITQHLEIGSYREWSEEKRQEWLLAELGGKRPLFGPDLPKTEEIADVLDTLNVLAELPSDCFGAYIISMATAASDVLAVELLQRECHVKKSLRVVPLFEKLADLEAAPAAMTRLFSIDWYKNRINGKQEVMIGYSDSGKDAGRLSAAWQLYKAQEELIKVAKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPRPEWRKLMDEIAVFATEHRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKYAIQKDSKNLKMLQEMYKTWPFFRVTIDLVEMVFAKGDPGIAALNDKLLVSEDLWSFGESLRANYEETKDHLLKIAGHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYHVTLRPHISKEYSEPSKPADELITLNPTSEYAPGLEDTLILTMKGIAAGMQNTG | 970 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g02064 | 970 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 1. | 223 | 234 | IPR018129 | - | |
| Ccar2g02064 | 970 | Pfam | Phosphoenolpyruvate carboxylase | 758 | 970 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Ccar2g02064 | 970 | Pfam | Phosphoenolpyruvate carboxylase | 107 | 756 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Ccar2g02064 | 970 | PRINTS | Phosphoenolpyruvate carboxylase signature | 625 | 645 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Ccar2g02064 | 970 | PRINTS | Phosphoenolpyruvate carboxylase signature | 667 | 696 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Ccar2g02064 | 970 | PRINTS | Phosphoenolpyruvate carboxylase signature | 222 | 235 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Ccar2g02064 | 970 | PRINTS | Phosphoenolpyruvate carboxylase signature | 335 | 350 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Ccar2g02064 | 970 | PRINTS | Phosphoenolpyruvate carboxylase signature | 476 | 496 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Ccar2g02064 | 970 | PRINTS | Phosphoenolpyruvate carboxylase signature | 275 | 291 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Ccar2g02064 | 970 | Gene3D | Phosphoenolpyruvate-pyruvate domain | 363 | 479 | - | - | |
| Ccar2g02064 | 970 | FunFam | Phosphoenolpyruvate carboxylase 1 | 363 | 479 | - | - | |
| Ccar2g02064 | 970 | Hamap | Phosphoenolpyruvate carboxylase [ppc]. | 23 | 970 | IPR022805 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Ccar2g02064 | 970 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 2. | 627 | 639 | IPR033129 | - | |
| Ccar2g02064 | 970 | PANTHER | PHOSPHOENOLPYRUVATE CARBOXYLASE | 758 | 970 | IPR021135 | GO:0005829(PANTHER)|GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0008964(PANTHER)|GO:0009507(PANTHER)|GO:0015977(InterPro)|GO:0048046(PANTHER)|GO:0048366(PANTHER) | |
| Ccar2g02064 | 970 | SUPERFAMILY | Phosphoenolpyruvate-pyruvate domain | 105 | 970 | IPR015813 | GO:0003824(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g02064 | K01595 | phosphoenolpyruvate carboxylase [EC:4.1.1.31] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 37984 | Ccar17g00230 | Ccar2g02064 | |
| 38874 | Ccar2g02064 | Ccar8g00994 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr12:4792671 | Ccar2g02064 | Ccar-Chr2:67787413 | dispersed | |
| Ccar | Ccar-Chr13:6012720 | Ccar2g02064 | Ccar-Chr2:67787413 | dispersed | |
| Ccar | Ccar-Chr17:2517551 | Ccar2g02064 | Ccar-Chr2:67787413 | wgd | |
| Ccar | Ccar-Chr2:67787413 | Ccar8g00994 | Ccar-Chr8:23973399 | wgd |