AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g02078 | ATGGCGTCTTCAGTGATGATGATCTGTGTTGATTGCTTTGAATTGTGTGTTATTTCTTATTTAATGGATGCTCAATTTCTTCTTCCCCTGTTCAACAATCAGATTCTGGTGCAACAGGATTCCAAGATTGCAAATGGACTTAAGGTTCGGGATAATTCTGGGATAGAATCAAGTTTTCGTGCTGGTAGTACCAAAGTTATTGGTCGAAGCACTGGAAAGGAATTTGCTGCCACTCGAATCCAAACTGCGTATCGTTCTTACAGGGCAAGAAAAATGTTACGTTGTTTGAAAGGGACGTCAAGATTTCAGGCATTGGTCGAGGCAGATGCTCTTACGAAGCAAGCTTCTTCTGCTCTTGACAAAATACATTTTTGGAGCAGAATACAAACGGAAATCAAAAGCCGACGCTACTGGATGGCGGCAGAGAGCCGGATAAAGCAAAAGAAGCTTGAAAATCGAGTGCAAGTCGAGTCTAAACTTCATGAACTCGAGTGGAGGGCGAACCCAAATCGATATTTTGGTCAAGCTTACTATGATCTAAGCAAAGAGAGCTGGGGATGGAGCTGGAAGGAGCGGTGGATCGCGGTGTGCCCATGGGAGGCTCGGGTGGTTGCACGGCCGGTCGGCAAACAGAACAAGGCGTCTAGAACCACAAAGCATGGTGCACCAAAGATTGTGGTTGCAGTTTTCGCCATTGCCATCAGCAACAGTTTTCAATAA | 720 | 45.28 | MASSVMMICVDCFELCVISYLMDAQFLLPLFNNQILVQQDSKIANGLKVRDNSGIESSFRAGSTKVIGRSTGKEFAATRIQTAYRSYRARKMLRCLKGTSRFQALVEADALTKQASSALDKIHFWSRIQTEIKSRRYWMAAESRIKQKKLENRVQVESKLHELEWRANPNRYFGQAYYDLSKESWGWSWKERWIAVCPWEARVVARPVGKQNKASRTTKHGAPKIVVAVFAIAISNSFQ | 239 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g02078 | 239 | ProSiteProfiles | IQ motif profile. | 73 | 101 | - | - | |
| Ccar2g02078 | 239 | PANTHER | IQ-DOMAIN 5-RELATED | 70 | 211 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g02078 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 37976 | Ccar17g00213 | Ccar2g02078 | |
| 38881 | Ccar2g02078 | Ccar8g00909 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr17:2356012 | Ccar2g02078 | Ccar-Chr2:67962590 | wgd | |
| Ccar | Ccar-Chr2:67962590 | Ccar8g00959 | Ccar-Chr8:23424140 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ccar11g01158 | . | 1 | 413 | IQD Protein family | AT2G26180 | 56.885 | 6.95e-134 | 389.0 | |
| Ccar11g00979 | ACH | 1 | 481 | IQD Protein family | AT4G23060 | 41.961 | 2.32e-69 | 226.0 | |
| Ccar11g00624 | . | 1 | 794 | IQD Protein family | AT1G19870 | 35.068 | 4.32e-102 | 332.0 | |
| Ccar11g00551 | ACH | 21 | 450 | IQD Protein family | AT5G03040 | 43.936 | 4.87e-95 | 293.0 | |
| Ccar11g00045 | ACH | 1 | 517 | IQD Protein family | AT3G59690 | 38.131 | 1.65e-82 | 259.0 | |
| Ccar16g00572 | . | 1 | 218 | IQD Protein family | AT3G22190 | 52.768 | 3.09e-54 | 189.0 | |
| Ccar16g00505 | . | 211 | 393 | IQD Protein family | AT3G22190 | 44.845 | 1.52e-39 | 138.0 | |
| Ccar16g00246 | . | 130 | 493 | IQD Protein family | AT4G00820 | 30.481 | 1.99e-34 | 130.0 | |
| Ccar16g00115 | ACH | 1 | 480 | IQD Protein family | AT4G23060 | 35.887 | 3.23e-47 | 166.0 | |
| Ccar7g00697 | . | 1 | 374 | IQD Protein family | AT4G14750 | 31.888 | 2.43e-35 | 131.0 | |
| Ccar7g00623 | . | 5 | 100 | IQD Protein family | AT3G51380 | 50.485 | 1.55e-22 | 82.8 | |
| Ccar7g00163 | . | 106 | 169 | IQD Protein family | AT1G14380 | 70.312 | 1.85e-23 | 92.0 | |
| Ccar7g00164 | ACH | 220 | 576 | IQD Protein family | AT1G74690 | 38.462 | 7.26e-45 | 160.0 | |
| Ccar8g01103 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 48.936 | 2.27e-76 | 238.0 | |
| Ccar8g00959 | . | 115 | 234 | IQD Protein family | AT3G15050 | 62.295 | 5.03e-49 | 155.0 | |
| Ccar8g00196 | . | 1 | 332 | IQD Protein family | AT3G16490 | 42.663 | 1.98e-47 | 164.0 | |
| Ccar9g00589 | . | 99 | 288 | IQD Protein family | AT4G14750 | 34.158 | 1.71e-17 | 79.7 | |
| Ccar15g01247 | . | 34 | 534 | IQD Protein family | AT4G00820 | 46.023 | 2.87e-117 | 363.0 | |
| Ccar12g00847 | . | 1 | 260 | IQD Protein family | AT2G33990 | 47.312 | 9.77e-69 | 213.0 | |
| Ccar12g00522 | . | 1 | 443 | IQD Protein family | AT5G13460 | 44.027 | 4.87e-98 | 298.0 | |
| Ccar10g01155 | ACH | 1 | 203 | IQD Protein family | AT5G03040 | 50.0 | 5.87e-51 | 172.0 | |
| Ccar10g00718 | ACH | 316 | 516 | IQD Protein family | AT3G59690 | 45.815 | 1.49e-38 | 143.0 | |
| Ccar10g00321 | . | 1 | 469 | IQD Protein family | AT3G49260 | 38.742 | 2.94e-65 | 213.0 | |
| Ccar17g00213 | ACH | 48 | 241 | IQD Protein family | AT3G15050 | 36.923 | 1.66e-33 | 119.0 | |
| Ccar5g01480 | ACH | 1 | 554 | IQD Protein family | AT1G74690 | 39.539 | 4.78e-73 | 241.0 | |
| Ccar13g01051 | ACH | 50 | 360 | IQD Protein family | AT5G07240 | 43.626 | 8.63e-41 | 146.0 | |
| Ccar13g00802 | ACH | 107 | 452 | IQD Protein family | AT5G03040 | 39.95 | 3.89e-72 | 237.0 | |
| Ccar3g01748 | . | 1 | 414 | IQD Protein family | AT1G72670 | 43.172 | 8.23e-89 | 273.0 | |
| Ccar3g01691 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 49.766 | 4.94e-95 | 289.0 | |
| Ccar3g00729 | ACH | 1 | 280 | IQD Protein family | AT5G03040 | 39.799 | 5.20e-58 | 196.0 | |
| Ccar1g02419 | . | 208 | 346 | IQD Protein family | AT1G19870 | 43.165 | 5.62e-22 | 99.0 | |
| Ccar1g01102 | ACH | 1 | 576 | IQD Protein family | AT1G74690 | 38.345 | 7.70e-81 | 263.0 | |
| Ccar1g00704 | ACH | 130 | 450 | IQD Protein family | AT5G03040 | 51.524 | 1.88e-91 | 280.0 | |
| Ccar1g00483 | ACH | 1 | 450 | IQD Protein family | AT5G03040 | 44.401 | 4.80e-106 | 322.0 | |
| Ccar1g00099 | ACH | 7 | 332 | IQD Protein family | AT5G07240 | 40.922 | 6.69e-28 | 110.0 | |
| Ccar2g02078 | ACH | 37 | 240 | IQD Protein family | AT3G15050 | 38.318 | 1.60e-40 | 138.0 | |
| Ccar2g01899 | . | 1 | 388 | IQD Protein family | AT5G35670 | 42.926 | 2.68e-75 | 238.0 | |
| Ccar2g01620 | . | 320 | 392 | IQD Protein family | AT2G43680 | 71.053 | 3.37e-29 | 112.0 | |
| Ccar2g00289 | . | 1 | 353 | IQD Protein family | AT3G16490 | 42.518 | 2.36e-53 | 181.0 |