AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02083 ATGGCTGCTGATTCAGTAGTTGAGATCGAGAATATGGAAGAATCAACAGTTCATGTTTTCAAATCATCATCGGAGTTGCTTGAGAAGTTGCATCAGAAGTGGAGTTCAGTGGAGAAGCTGCCATATCCAGCTATGTATTCCAGTGTTTATGGTGGAATTATACTGGATCCAGCAATGATGGTCATCCCCATTGATGATCATATGGTGCATAGAGGACATGGTGTATTTGATACTGCCATCATTCTTGATGGATACCTCTATGAATTGGATGGTCATCTTGATCGATTTCTTCTCTCGGCATCAAGAGCAAAGATCACGTCTCCATTCCCAAAATCGACTCTTTCCACCATTCTTATCCAGCTAACAGCAGCATCAAACTGCAAGAAAGGAACTTTAAGATATTGGTTAAGTGCAGGGCCGGGCGATTTCCTGCTTTCTCCTGCAGGTTGCCCAACTTCCGCTTTCTATGCGATTGTTATAGCCGAAGAGTTCTCCCAGTGTAAAGAAGGTGTGAAAGTGATCACTTCCACGATCCCCATGAAAGTACCTCTATTTGCCACAAGCAAAAACGTCAATTACCTTCCAAACGTCCTCACGAAACTGGAAGCTGAAGAGAAAGGTGCGTTTGCGTCCATTTGGGTGGACGATGAAGGGTATGTGGCCGAGGGTCCAAACGTGAATGTGGGTTTTGTCACCCATGAGAATGAGCTTATCGTGCCTTTCTTTGACAAGATTCTAAGTGGGTGCACCGTTAAACGGCTTCTTGAGCTAGCTCCAAAATTGGTCGAAAATGGGCGTTTGAAGAGCGTGAAAACCGCAAACATAACGGTTGAGGAAGCCAAACGAGCGGCTGAGATGATGTACATTGGAAGCACGCTTCCTGTACTACCAATCATCGAATGGGATGGAAAGGCTATCGGCGATGTTTGTACGAAACACGCAAACGCTAGTAAGAAGCACGATAGCATGGAAACGTACTTGATCGAGCTCGTGGAACGACTCGTGTCTCCTAAGATGAAGTTGCTTGAAAAGACTTTTGTCGAAGAACCTCCGAGTACAGCTCCGATAAGCGAGCACAAAGCCAGCGAAATCGAAGACAAAGAAGTTGCTGCAGATAAGTGA 1122 45.28 MAADSVVEIENMEESTVHVFKSSSELLEKLHQKWSSVEKLPYPAMYSSVYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILDGYLYELDGHLDRFLLSASRAKITSPFPKSTLSTILIQLTAASNCKKGTLRYWLSAGPGDFLLSPAGCPTSAFYAIVIAEEFSQCKEGVKVITSTIPMKVPLFATSKNVNYLPNVLTKLEAEEKGAFASIWVDDEGYVAEGPNVNVGFVTHENELIVPFFDKILSGCTVKRLLELAPKLVENGRLKSVKTANITVEEAKRAAEMMYIGSTLPVLPIIEWDGKAIGDVCTKHANASKKHDSMETYLIELVERLVSPKMKLLEKTFVEEPPSTAPISEHKASEIEDKEVAADK 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02083 373 PANTHER AMINO-ACID AMINOTRANSFERASE 34 309 IPR050571 GO:0019752(PANTHER)
Ccar2g02083 373 MobiDBLite consensus disorder prediction 359 373 - -
Ccar2g02083 373 FunFam D-amino-acid transaminase, chloroplastic 22 160 - -
Ccar2g02083 373 Gene3D - 162 328 IPR043132 -
Ccar2g02083 373 Gene3D - 21 161 IPR043131 -
Ccar2g02083 373 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 50 308 IPR036038 GO:0003824(InterPro)
Ccar2g02083 373 MobiDBLite consensus disorder prediction 349 373 - -
Ccar2g02083 373 Pfam Amino-transferase class IV 74 301 IPR001544 GO:0003824(InterPro)
Ccar2g02083 373 FunFam D-alanine aminotransferase 162 316 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02083 K18482 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]