AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02085 ATGTCGGCAATGGAGGAAGATTACTCTGTTGATGCTTCAAAGCTTCTCCAAGCAGCTTCTGACTTCTCGTTTGATCCTGGTACTCGGTCAGAAGCTGCTGTGAAGGAATTTATTGGCTCTTTTCCCCTTCCTGTTATCATCAATGCGCTGCAAACCAAAGGAGATGTGCCTGGTTTGGAGGATGCATTGGTTGATTGTCTAGAGAAGATATTTAGAACAAAGTATGGGGCCTCTCTTATCCCAGAATACATGCCTTTCATTGTGGTTGGCCTGCAAGCATATTCTCAGAGAGTCATAACTTTGGCTTGTAAAACGATCTCTAGCCTTTTGGAGAATCTTGATGATACTGGTTTCGCTACTTCACTGATAAAAGAGAATTGCGCGTATCCGCTTTTGCTTAATTGTCTCATTGATGGTGATGAACAAGTGGCTGTTGCTGCGACAGATGCAATCAGGACTTTAGCAAGCTCTCAACAGGGAATCGAAATCATATTCCCAGCTACTCCCAGTGAAACTACAGATATTACAAAGTTAGCAGCAAGATGTTCATCAATGGGACGAGTACGAGTTTTGGCATTGATTGTGAAGCTATTTTCTACTTCCAGTGCAGTAGCATCGTTAGTTTACAACTCAAATCTTCTTGGTCTCATGGAGGCAGAAGTTCGTAATACTAAAGATACCCTCATGACCTTGAGCATGTTGGAGCTCCTTTACGAGGTTTGTCATTATTCTGTTATTGTTTCACTTCCCGTTTATTTGCAACCACTACATGATTTGGCTGAGGTCCAGCATGGAATGGAATATGTGCTACGGACCAATATCTTGCAGTTACTTATTTCTATAATCAGAAATTCTTCTGCTGAATCGATGTTGAGGTCAAGGGCAATGATGATAAGCGGACGGCTTTTATCGAAGGAGAATGTTCTTATGTTTATAGACGAATCCAGTATTAAAGCTGTGATTTCAGCCATTGACGAAAGGCTTTCATTGCTAGATAATCAAGATGCAGATGAATGTGAATGTGGTCTTGAAGCAATAGGTCAAATAGGGTCATGA 1056 41.38 MSAMEEDYSVDASKLLQAASDFSFDPGTRSEAAVKEFIGSFPLPVIINALQTKGDVPGLEDALVDCLEKIFRTKYGASLIPEYMPFIVVGLQAYSQRVITLACKTISSLLENLDDTGFATSLIKENCAYPLLLNCLIDGDEQVAVAATDAIRTLASSQQGIEIIFPATPSETTDITKLAARCSSMGRVRVLALIVKLFSTSSAVASLVYNSNLLGLMEAEVRNTKDTLMTLSMLELLYEVCHYSVIVSLPVYLQPLHDLAEVQHGMEYVLRTNILQLLISIIRNSSAESMLRSRAMMISGRLLSKENVLMFIDESSIKAVISAIDERLSLLDNQDADECECGLEAIGQIGS 351
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02085 351 SUPERFAMILY ARM repeat 44 349 IPR016024 -
Ccar2g02085 351 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 4 351 IPR019538 GO:0005829(PANTHER)|GO:0043248(InterPro)
Ccar2g02085 351 Gene3D - 9 351 IPR011989 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02085 K06692 26S proteasome non-ATPase regulatory subunit 5