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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02088 ATGGGTCGGATATTTTTGGTGGAGTTAGAAGGAAGGACTTACAAATGCAAGTTCTGCAAAACAAATTTATCCCTCGCCGAGAATGTCGTTTCACGGGGTTTTCATTGCCGCAGAGGAAAAGCATACCTGTTCAGCAACGTAGGAAGGATCATCGACGGACTTGATTCAGAATTTTACATTGATACCCGTCCGAGTTCAAGCGATGCTGAAGAAGCCTAG 219 44.75 MGRIFLVELEGRTYKCKFCKTNLSLAENVVSRGFHCRRGKAYLFSNVGRIIDGLDSEFYIDTRPSSSDAEEA 72
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02088 72 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 52 IPR039058 -
Ccar2g02088 72 ProSiteProfiles Yippee domain profile. 12 72 IPR034751 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02088 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:68115936 Ccar13g00927 Ccar-Chr13:12679715 transposed