AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02097 ATGGAGATCGTCTCAAGACAACACGATACCGAAAACCCATCTCCCGCAAACTCTCCGTCTAGCAACGGCAGCAGTAGCAACAGCAATGGACATGCCGCCGCTGCCGGCGGTGGTGCCGCCATCCAAACCCCACCACTAACTCCAAGACCCGTTTCAAGATCCGAACCAAATCCATACCCAACCACTTTCGTCCAAGCCGACACAACTTCCTTCAAGCAAGTAGTCCAGATGCTAACCGGATCATCCAAACCGACCCAACAACCAGATCCGACTCCGTCCAAGATATCCATACCGCCGATCAAAACCGGCCAACAGAAAAAACAAGGATTCAAGCTCTACGAACGCCGGAACAGCCTAAAAAACGGGCTTATGATTAACCCGTCGGTGCCGAAGTTCGGCCACGGCCATGGATTATCACCGAGAATCCATGAAATACTCTCGCCAAGCATTCTTGATTTTCCGTCGCTTGTTCTAAGTCCGGTGACGCCATTGATCGAAGACCCGTTTAATAAATCATCGCCGTCGATTGGGAATTCGTCGGAGGAAGAAAGGGTAATTGCACAAAAAGGGTTTTACTTGCATCCGTCGCCTAGGGCGGCGACTCCACATGGGACGGCGGAGCCTCAGCTGTTACCTCTTTTTCCGGTCACGTCGCCGCGGGTATCGGAATCGTCGATTTAG 681 52.28 MEIVSRQHDTENPSPANSPSSNGSSSNSNGHAAAAGGGAAIQTPPLTPRPVSRSEPNPYPTTFVQADTTSFKQVVQMLTGSSKPTQQPDPTPSKISIPPIKTGQQKKQGFKLYERRNSLKNGLMINPSVPKFGHGHGLSPRIHEILSPSILDFPSLVLSPVTPLIEDPFNKSSPSIGNSSEEERVIAQKGFYLHPSPRAATPHGTAEPQLLPLFPVTSPRVSESSI 226
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02097 226 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 24 222 IPR039611 -
Ccar2g02097 226 MobiDBLite consensus disorder prediction 56 90 - -
Ccar2g02097 226 MobiDBLite consensus disorder prediction 1 108 - -
Ccar2g02097 226 MobiDBLite consensus disorder prediction 8 32 - -
Ccar2g02097 226 Pfam VQ motif 58 83 IPR008889 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02097 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
37965 Ccar17g00187 Ccar2g02097
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr14:1709690 Ccar2g02097 Ccar-Chr2:68182389 dispersed
Ccar Ccar-Chr2:68182389 Ccar4g00793 Ccar-Chr4:18554006 dispersed
Ccar Ccar-Chr17:2080830 Ccar2g02097 Ccar-Chr2:68182389 wgd