Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g02122	ATGAATGTTGGCGATCTTCACAAGGTCTGGGAAATCAGAACGTTAAAGAGGAAGGTTGGAGGAGATGAGGCTGGAAGATTCCTTGAGAAAATCGCCAAACAGGTTCAACCTATCATGCGCAAGCATAAATGGAGGGTTAAAGTTCTATCCGAAATGTGTCCCAAAAACCCTAGTCTTCTAGGTCTGAACGTCGCCCATGGTGTTCATGTAAAGCTAAGACTTCGAAGACCAAATACAGATTGGGATTGGTACCCTTTTGATGAAGTTCTTGATACAATGCTACATGAACTGTGTCATAACGCCATTAGTGCTCATAATGCTGCTTTCTACAAACTCTGGGATGAGCTCAGAAAGGAATGTGAGCAGCTGATTAATGAAGGAATTTCTGGGTCCGCAACTGGGTTTGATCTTCCCGGCAGACGTTTAGGTGGCTTTTCTCGTCAACCTCCTCTCTCATCTCTCCGCCAGACTGCACTTCTTGCTGCAGAAAACAGAAAACGCCAAGGATCGCTTTTACCATCAGGACCTAAACGCCTTGGTGGCAATAAATCCATCATGTCTTCCCTAACTCCTGTACAAGCAGCTGCCATGGCTGCTGAAAGGAGATTTCAAGATGATCTATGGTGTGGCCTAGAGGAAACAGTCGAGGAAGAAGAAAGTGGCGCTGCTGTCCCACAACAGCACCAAAATATAAGAAACTCGGCGTCCTCTAGTGGTCTAGGTGCTGATACAGATGCCAGGTCTCAGAAAAGAAGTCGTCAAGAAACCAATAAGCTGCGGTCTCAGTGCTGTGATGGTCATTCGGAACCAAATTTTGTTGACTTAACTGATGTTCCATCAGTATCCAACAACATATCAACTAATAAAAGAAGTCACCGAACAGAAAAGGACGCAAGTATGCCTTCACGACACAATTTTGAGAAAAGTTGTATTGATTTAACAGGTGATGATGCTTCTACTAGCAATCAAAAAACAGAATGTGAAACAAAGTCATCTGGGTGGGCGTGCTTGACGTGCACATTGCTGAACCCGCTATGCGGAACCCACAAACCGAAAGCTAAGGAAGACAAGTATAAGGCGTGGTCGTGCAAATTTTGTACATTGGAGAACAACGTGAAGTTAGAGAAATGCGGAGCTTGTGGGCAATGGAGATATTCTTATGGCCAACCGATAGCAACCCCTTCGCCAAATGTGGGTACTTAA	1203	44.72	MNVGDLHKVWEIRTLKRKVGGDEAGRFLEKIAKQVQPIMRKHKWRVKVLSEMCPKNPSLLGLNVAHGVHVKLRLRRPNTDWDWYPFDEVLDTMLHELCHNAISAHNAAFYKLWDELRKECEQLINEGISGSATGFDLPGRRLGGFSRQPPLSSLRQTALLAAENRKRQGSLLPSGPKRLGGNKSIMSSLTPVQAAAMAAERRFQDDLWCGLEETVEEEESGAAVPQQHQNIRNSASSSGLGADTDARSQKRSRQETNKLRSQCCDGHSEPNFVDLTDVPSVSNNISTNKRSHRTEKDASMPSRHNFEKSCIDLTGDDASTSNQKTECETKSSGWACLTCTLLNPLCGTHKPKAKEDKYKAWSCKFCTLENNVKLEKCGACGQWRYSYGQPIATPSPNVGT	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g02122	400	MobiDBLite	consensus disorder prediction	246	262	-	-
	Ccar2g02122	400	MobiDBLite	consensus disorder prediction	223	245	-	-
	Ccar2g02122	400	PANTHER	DNA-DEPENDENT METALLOPROTEASE WSS1	1	399	IPR053000	GO:0005634(PANTHER)\|GO:0006281(PANTHER)\|GO:0008237(PANTHER)
	Ccar2g02122	400	ProSiteProfiles	Zinc finger RanBP2 type profile.	354	386	IPR001876	-
	Ccar2g02122	400	ProSiteProfiles	WLM domain profile.	1	204	IPR013536	-
	Ccar2g02122	400	MobiDBLite	consensus disorder prediction	214	301	-	-
	Ccar2g02122	400	ProSitePatterns	Zinc finger RanBP2-type signature.	361	380	IPR001876	-
	Ccar2g02122	400	MobiDBLite	consensus disorder prediction	165	184	-	-
	Ccar2g02122	400	Pfam	WLM domain	8	203	IPR013536	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g02122	K22685	DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr2:68457881	Ccar3g01811	Ccar-Chr3:39989512	dispersed