AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02131 ATGAAGAACAATCAGGCCATGCAGGAGTCCAAGAACATTCCAGAAATACAGCCCTTGACCACCCAAGTTTCACACGAGTCTCAAAGTGACCAGCTTAATAATGCAACAGAGGCTCCTGTTCCTGACTCTGGTTCAGCCTCCATTTCGAGCAATGACAACAGAAAAGTTTCGCGCGAGGATATTGAACTTGTCCAGAACTTGATAGAACGTTGTTTGCAGCTGTACATGAACAGAGACGAGGTGGTGAAAACGTTACTAAATCGTGCGAGGATTGATCCTGGTTTCACAACTTTAGTTTGGCAGAAATTGGAAGAAGAAAATGCAGACTTTTTCAGAGCTTATTACATACGGCTGAAACTGAAAAAGCAGATTATCATGTTCAACCATTTACTTGAACATCAATACCATCTTATGAAGTATCCGGTTCATCCAAAGCTTCCTCTTGCTCCCATACAAAATGGCATCCATCCCATGCCAGTTAACAATTTACCAATGGGATACCCTGTTCTACCACAACCTTCGATGCCAAGTGCAGGTCAACCTCATATGAATGCCATGGGTATATCTACCTGTCATGTGGTCAACGGAGTGCCTGCTCCAAGTAACTTCCATCCGATGCGTATGAACTCTGGAAATGAAAGTATGGGGATGGACAACAGTGCAGCTGATGTCACCCCTACTATTCCAACGAATGGGGCCATTTCACCCATATCAGATATGCCTATGAGTCCTACGTCAGTGGCGTCCAGCGGCCATTTCCCATTTACCACATCTGAAATATCGGGGATGGGAGTTGACACATCAGCTCTTGACACAGCTTTTACATCTGACGTGGCAAGTTCAGTAGGATTGCATCTGCCACCTGATAATGGAACTTCTAGACCGTTTGGTCATATTCCTTGGAATTTCAGCCTTTCAGATCTTACAGCCGACTTATCGAACTTGGGAGTGGAAGAGTTCTTTGCCGACTCTGTTCCTGGACCACCATGCTCCAATTCAGACGAAGAGAAATCCTAG 1017 44.94 MKNNQAMQESKNIPEIQPLTTQVSHESQSDQLNNATEAPVPDSGSASISSNDNRKVSREDIELVQNLIERCLQLYMNRDEVVKTLLNRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQIIMFNHLLEHQYHLMKYPVHPKLPLAPIQNGIHPMPVNNLPMGYPVLPQPSMPSAGQPHMNAMGISTCHVVNGVPAPSNFHPMRMNSGNESMGMDNSAADVTPTIPTNGAISPISDMPMSPTSVASSGHFPFTTSEISGMGVDTSALDTAFTSDVASSVGLHLPPDNGTSRPFGHIPWNFSLSDLTADLSNLGVEEFFADSVPGPPCSNSDEEKS 338
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02131 338 MobiDBLite consensus disorder prediction 1 55 - -
Ccar2g02131 338 MobiDBLite consensus disorder prediction 1 52 - -
Ccar2g02131 338 PANTHER OS02G0137100 PROTEIN 53 319 IPR006476 -
Ccar2g02131 338 Pfam Plant protein 1589 of unknown function (A-thal-3526) 64 115 IPR006476 -
Ccar2g02131 338 NCBIfam TIGR01589 domain 61 117 IPR006476 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02131 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
38886 Ccar2g02131 Ccar6g00535
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:68523973 Ccar5g00562 Ccar-Chr5:7791273 dispersed
Ccar Ccar-Chr2:68523973 Ccar6g00535 Ccar-Chr6:15996135 wgd