AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g02138 | ATGGAAGCCATGAATCATTACAACCATCTACCACTCAACATCGCCGTCACCACTCACCGTCAGGTGGTTCCGATCACATTGTTCGTCGCCGTCCTCTGTCTCTGTTTAGTAATCGGACACTTACTGGACGAAAATCGATGGGTTAACGAATCCATCACCGCTATCATCATTGGATGTATTGTTGGAACGATCATCTTAATCGTAAGTAAGTGGAAAAGCTCTCGTCTGCTCAGATTCGATGAAGAACTGTTCTTCATTTATCTTCTTCCACCAATAATCTTCAACGCAGGGTTTCAGGTGAAGAAGAAACAGTTTTTCCACAACTTTTTTCCGATCATGTTGTTCGGAGTTGCTGGTGTTTTCATATCAACATCTATCGTTGCCGCCGGGGTCGTGAACGATGCGACATCGGTCGTTCTTTTCAACGCGGTTCGAAAGCTCAATGCGAATACATTTCGTGGCAAGGCTGTTCTCCACATCTTACTAGATTTCTTACATTCGAGTGTTCGTGAAATTTCTTTGATGATTCTAGTAGCGTATTTGTCGTACATATTGGCGGAGCTATTTGAACTCAGCGGCATTCTGACGGTCTTCTTTGCTGGAGTTCTGATGTCACATTATGCATGGCATAACTTTACGCTCTCTGGAGTGACACTGGATCCAACCAATGCCACGATGATCACCACTACGATTGTGTTCGGTCTCTTGACAAAACCGCTTATTAGTTATCTTCTTCCTAATAACGTAACTATGTGTGGTGTCCCCCGTCGAACTACATCTCCCAAAGAGGAAATGACGCTTCCGTTGCTTTCTTTCGAAGAATCGGCTTCTGAAAATCTCTCTAGGGCAAAGGAGAACATATCGATGTTAATGGAAAGGCCCGTTTACACGATCCACTCCTACTGGCGGAGGTTTGATGATACTTACATGCGACCTATATTTGGTGGGGCTCGTAGCAATGATTCTTCGAGCTAG | 975 | 44.41 | MEAMNHYNHLPLNIAVTTHRQVVPITLFVAVLCLCLVIGHLLDENRWVNESITAIIIGCIVGTIILIVSKWKSSRLLRFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFFPIMLFGVAGVFISTSIVAAGVVNDATSVVLFNAVRKLNANTFRGKAVLHILLDFLHSSVREISLMILVAYLSYILAELFELSGILTVFFAGVLMSHYAWHNFTLSGVTLDPTNATMITTTIVFGLLTKPLISYLLPNNVTMCGVPRRTTSPKEEMTLPLLSFEESASENLSRAKENISMLMERPVYTIHSYWRRFDDTYMRPIFGGARSNDSSS | 324 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g02138 | 324 | Coils | Coil | 273 | 293 | - | - | |
| Ccar2g02138 | 324 | PANTHER | SODIUM-HYDROGEN EXCHANGER | 160 | 214 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(InterPro)|GO:0015385(PANTHER)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Ccar2g02138 | 324 | PRINTS | Na+-H+ exchanger signature | 97 | 111 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Ccar2g02138 | 324 | PRINTS | Na+-H+ exchanger signature | 112 | 120 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Ccar2g02138 | 324 | PRINTS | Na+-H+ exchanger signature | 83 | 94 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Ccar2g02138 | 324 | Pfam | Sodium-hydrogen exchanger family | 158 | 210 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Ccar2g02138 | 324 | Pfam | Sodium-hydrogen exchanger family | 39 | 126 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g02138 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr2:68584535 | Ccar9g00620 | Ccar-Chr9:13430762 | dispersed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ccar11g01156 | . | 79 | 366 | Antiporters gene family | AT4G28390 | 39.116 | 1.45e-59 | 194.0 | |
| Ccar11g01147 | . | 44 | 584 | Antiporters gene family | AT2G19600 | 78.245 | 0.0 | 825.0 | |
| Ccar11g00938 | . | 110 | 190 | Antiporters gene family | AT1G79900 | 36.585 | 3.33e-07 | 50.1 | |
| Ccar11g00515 | ACH | 63 | 566 | Antiporters gene family | AT5G17860 | 48.819 | 1.27e-173 | 501.0 | |
| Ccar11g00261 | ACH | 1 | 557 | Antiporters gene family | AT5G12860 | 81.35 | 0.0 | 880.0 | |
| Ccar11g00247 | . | 1 | 297 | Antiporters gene family | AT5G13490 | 68.687 | 5.24e-132 | 377.0 | |
| Ccar16g00792 | . | 63 | 120 | Antiporters gene family | AT5G01490 | 60.345 | 1.21e-20 | 82.8 | |
| Ccar16g00491 | . | 19 | 407 | Antiporters gene family | AT5G17630 | 73.265 | 0.0 | 544.0 | |
| Ccar16g00460 | . | 4 | 543 | Antiporters gene family | AT3G05030 | 67.956 | 0.0 | 723.0 | |
| Ccar16g00271 | . | 30 | 283 | Antiporters gene family | AT1G79900 | 34.532 | 1.96e-41 | 143.0 | |
| Ccar16g00156 | ACH | 1 | 795 | Antiporters gene family | AT4G23700 | 57.928 | 0.0 | 871.0 | |
| Ccar8g00875 | . | 97 | 440 | Antiporters gene family | AT1G55730 | 68.617 | 0.0 | 513.0 | |
| Ccar8g00662 | ACH | 40 | 563 | Antiporters gene family | AT5G64290 | 66.415 | 0.0 | 650.0 | |
| Ccar8g00042 | ACH | 46 | 559 | Antiporters gene family | AT5G17860 | 41.636 | 1.90e-137 | 410.0 | |
| Ccar9g00620 | . | 11 | 534 | Antiporters gene family | AT3G05030 | 53.89 | 0.0 | 549.0 | |
| Ccar9g00530 | . | 1 | 695 | Antiporters gene family | AT2G47160 | 80.884 | 0.0 | 1131.0 | |
| Ccar15g01302 | . | 30 | 283 | Antiporters gene family | AT1G79900 | 34.211 | 5.26e-41 | 141.0 | |
| Ccar15g01153 | ACH | 1 | 795 | Antiporters gene family | AT4G23700 | 63.899 | 0.0 | 1012.0 | |
| Ccar15g01123 | . | 11 | 437 | Antiporters gene family | AT4G23700 | 70.721 | 0.0 | 613.0 | |
| Ccar15g01000 | . | 6 | 810 | Antiporters gene family | AT2G13620 | 69.487 | 0.0 | 1162.0 | |
| Ccar15g00942 | . | 13 | 543 | Antiporters gene family | AT3G05030 | 67.797 | 0.0 | 721.0 | |
| Ccar12g01332 | . | 311 | 433 | Antiporters gene family | AT1G55730 | 78.4 | 3.36e-59 | 189.0 | |
| Ccar12g01182 | . | 246 | 475 | Antiporters gene family | AT3G05030 | 33.621 | 4.56e-25 | 107.0 | |
| Ccar12g00799 | . | 950 | 1142 | Antiporters gene family | AT2G01980 | 37.245 | 1.84e-21 | 90.9 | |
| Ccar12g00801 | . | 1 | 385 | Antiporters gene family | AT5G13490 | 76.59 | 0.0 | 593.0 | |
| Ccar12g00491 | . | 49 | 312 | Antiporters gene family | AT1G61800 | 76.015 | 1.25e-153 | 435.0 | |
| Ccar12g00179 | . | 138 | 373 | Antiporters gene family | AT5G46110 | 63.983 | 1.97e-97 | 290.0 | |
| Ccar4g00911 | . | 38 | 566 | Antiporters gene family | AT5G17860 | 43.058 | 8.23e-145 | 430.0 | |
| Ccar4g00845 | ACH | 29 | 289 | Antiporters gene family | AT1G79900 | 64.207 | 4.65e-127 | 362.0 | |
| Ccar4g00819 | ACH | 3 | 669 | Antiporters gene family | AT1G15460 | 65.217 | 0.0 | 866.0 | |
| Ccar4g00641 | ACH | 50 | 404 | Antiporters gene family | AT5G33320 | 44.321 | 9.90e-75 | 234.0 | |
| Ccar6g00804 | ACH | 1 | 404 | Antiporters gene family | AT5G33320 | 46.117 | 4.99e-103 | 307.0 | |
| Ccar6g00602 | . | 21 | 385 | Antiporters gene family | AT1G61800 | 70.241 | 9.95e-178 | 498.0 | |
| Ccar10g01356 | . | 64 | 624 | Antiporters gene family | AT5G25430 | 61.462 | 0.0 | 757.0 | |
| Ccar10g01357 | . | 1 | 64 | Antiporters gene family | AT3G06450 | 50.0 | 1.70e-19 | 82.4 | |
| Ccar10g00919 | . | 1 | 385 | Antiporters gene family | AT5G13490 | 80.26 | 0.0 | 592.0 | |
| Ccar10g00923 | ACH | 1 | 557 | Antiporters gene family | AT5G12860 | 81.129 | 0.0 | 890.0 | |
| Ccar10g00881 | . | 312 | 367 | Antiporters gene family | AT1G55730 | 81.034 | 7.75e-23 | 94.0 | |
| Ccar10g00463 | . | 2 | 384 | Antiporters gene family | AT5G13490 | 80.311 | 0.0 | 598.0 | |
| Ccar10g00434 | . | 24 | 801 | Antiporters gene family | AT3G52080 | 41.207 | 0.0 | 594.0 | |
| Ccar10g00141 | . | 1 | 405 | Antiporters gene family | AT5G46110 | 78.261 | 0.0 | 636.0 | |
| Ccar10g00139 | . | 65 | 283 | Antiporters gene family | AT1G79900 | 27.706 | 4.01e-18 | 82.4 | |
| Ccar17g01197 | . | 44 | 591 | Antiporters gene family | AT2G19600 | 76.619 | 0.0 | 797.0 | |
| Ccar17g00559 | ACH | 92 | 563 | Antiporters gene family | AT5G64290 | 61.765 | 0.0 | 549.0 | |
| Ccar17g00286 | . | 325 | 407 | Antiporters gene family | AT1G55730 | 78.313 | 1.21e-38 | 137.0 | |
| Ccar17g00245 | . | 79 | 241 | Antiporters gene family | AT3G19490 | 75.152 | 1.89e-71 | 226.0 | |
| Ccar17g00119 | . | 17 | 387 | Antiporters gene family | AT5G54800 | 63.061 | 8.68e-152 | 432.0 | |
| Ccar5g01064 | ACH | 13 | 692 | Antiporters gene family | AT1G79400 | 36.364 | 3.93e-143 | 435.0 | |
| Ccar5g00871 | . | 175 | 266 | Antiporters gene family | AT3G13320 | 50.0 | 1.93e-24 | 95.1 | |
| Ccar5g00840 | . | 93 | 563 | Antiporters gene family | AT5G64290 | 72.824 | 0.0 | 705.0 | |
| Ccar5g00750 | . | 2 | 425 | Antiporters gene family | AT3G51860 | 54.93 | 2.45e-134 | 390.0 | |
| Ccar5g00029 | . | 28 | 193 | Antiporters gene family | AT3G06370 | 73.494 | 1.81e-75 | 236.0 | |
| Ccar13g01280 | . | 21 | 565 | Antiporters gene family | AT5G51710 | 70.884 | 0.0 | 797.0 | |
| Ccar3g01810 | . | 31 | 440 | Antiporters gene family | AT1G55730 | 70.714 | 0.0 | 583.0 | |
| Ccar3g01621 | ACH | 379 | 653 | Antiporters gene family | AT1G15460 | 56.727 | 3.68e-94 | 296.0 | |
| Ccar3g01649 | ACH | 1 | 286 | Antiporters gene family | AT1G79900 | 71.622 | 1.61e-145 | 409.0 | |
| Ccar3g01304 | . | 1 | 687 | Antiporters gene family | AT3G62270 | 74.425 | 0.0 | 1048.0 | |
| Ccar3g01182 | . | 6 | 302 | Antiporters gene family | AT5G17400 | 78.114 | 4.53e-169 | 472.0 | |
| Ccar1g01733 | . | 12 | 545 | Antiporters gene family | AT1G08960 | 63.686 | 0.0 | 643.0 | |
| Ccar1g01479 | ACH | 17 | 776 | Antiporters gene family | AT1G16380 | 37.306 | 3.59e-167 | 498.0 | |
| Ccar1g01046 | . | 60 | 381 | Antiporters gene family | AT3G01550 | 66.563 | 3.23e-139 | 399.0 | |
| Ccar1g00749 | . | 1 | 829 | Antiporters gene family | AT3G53720 | 65.824 | 0.0 | 1040.0 | |
| Ccar1g00750 | ACH | 44 | 567 | Antiporters gene family | AT5G17860 | 47.753 | 1.28e-164 | 478.0 | |
| Ccar2g02138 | . | 11 | 294 | Antiporters gene family | AT5G55470 | 49.296 | 7.97e-79 | 248.0 | |
| Ccar2g01758 | . | 48 | 576 | Antiporters gene family | AT3G19490 | 80.519 | 0.0 | 823.0 | |
| Ccar2g01256 | . | 43 | 842 | Antiporters gene family | AT5G58460 | 44.527 | 0.0 | 694.0 | |
| Ccar2g01251 | . | 102 | 790 | Antiporters gene family | AT1G06970 | 35.0 | 1.26e-147 | 449.0 | |
| Ccar2g01193 | . | 6 | 452 | Antiporters gene family | AT3G51860 | 68.653 | 0.0 | 547.0 | |
| Ccar2g00651 | . | 23 | 440 | Antiporters gene family | AT5G01490 | 54.415 | 2.05e-165 | 470.0 | |
| Ccar2g00341 | ACH | 58 | 555 | Antiporters gene family | AT5G17860 | 41.912 | 2.21e-136 | 410.0 |