Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g02155	ATGGGAGGGAAGCGATGGGTGAAGGAAGCGGGAGGCATATGGGAGGGAAGCGATGGAGCCTCTCAAAGTCGGGGTCATGAAGAAGTATCAGAGACTGTGAAAGAGGATATTGGTATGAAGCAACATTGGATGGTTAGGGCAATCTCCAAAACCCTAACCCTGATTCCAATTCCGTTTCATTCATCTCGTGCTTCCTTTTCCTCCCCTTCTTCGAGTTTCGCTCTCAAGAATGTTACTAGGTCCAACTTTGAGTTGTCTCTTGCTGACCTTCGTCGTCACGTCAGAGACTCGGATTTTGTGTCAATTGACTTGGAAATGACTGGAGTGACGAGCGCTCCTTGGAGGGAGTCATTTGAGTTTGACAGATTTGATGTTCGTTATCTCAAGGTGAAGGACTCTGCTGAGAAGTTTGCAGTTGTTCAGTTTGGGGTTTGCCCCTTCCGTTGGGACTCCACCAAGCAGTCATTCATTGCCCATCCGCACAACTTTTACATATTTCCCCGTCAAGAAGTTGGAGCTTATGACCCATCTTATGAGTTCCTGTGCCAGACTGCCTCAATTGATTTTTTGGCAAAGTACCAGTTTGATTTCAATCTGTGTGTAAAAGAAGGAATATCTTATTTATCTAGAGCACTAGAAGACGCAGCTAGATTACACTTACATTCAACACATGAAGATGAGTTATCAGAGTCACCATGCACAACCAAAGAAATTAAAGATGTTCCATTGGTTAGAATGGCAGATATTCTTTTTGTGGAGAGAATGAGGAACAAAATCAGTGAATGGCATGATGACCTGTTACAGATTAGAAATAGAAGGTCCAGCCAGATTCCAGAAGACTCTAATGACTCCATGAATCAGTTTCAGACCATCTTTTTTAGGATGCGTCCAGCCATCAAACTGAATGGATTCACTTCCCGCCAGCTAAGGTTGATTAAGTCGGTTATACAAAAGAGCTTCAAAGATTTAGCTTACATCCGTGTAAATGGTGCTTCATGTTTAGAACAATTTATCGTCTACACAAACTCCAGAAGGGACCTAGAGTTGCTTATGAAAGAGGTTAAAGGAGACCTTTGCAAGGAAGCAGAGATGAAGATTGGAGCTGCCATTGGCTTTCGGCATGTGATTGACCTCCTTTCCTCCGAACAAAAGTTGATTGTTGGACACAATTGCTTTCTTGATATTGCACATGTATGTAGAAAGTTTGTGGGTCCTCTTCCTTCGAATCTTGAGGAATATGTAACCTTAGTTCAAAAGAACTTTCCATACATAATTGACACGAAGATCCTCCTGAATGCAAGTAATGTATTGCAATTAAAGATGAAGAAGAGTAGCACTTCACTGTCCAAAGCTTTTGCCATTCTCTGCCCACATATTGCTTCTGGTGTCAGCAGCTCTGGCTTGGCTCCTAGTTCTGTCACAGTTGAGGTTCAAGTGGATGATATGAGATCATCAAACTGGAACTCTGGAGCTAAGCATGAAGCTGGTTATGATGCTTTCATGACAGGGTGCATTTTTGCCCAATCATGCAGTCATCTTAATATTGATTTCAGCTCTCACTCAATGTTGATGAAAGAAGAGAAGCTTCAAAAGTACATCAATCTTCTTTACCTCAGTTGGAGTTGTGGAGATATAGTTAACATAAAAACTGGTGGAACTACAACAGAATCTTCAGCATTTAACACTTTCAAAATCCAACCAACAAAGATTTTGTTTCCAAATATTGCCATAATTTGGGGCTTCCCGTCAAAGCTCAAGGCAAGGGAGATAAAAGAATCTCTTTGTAAAGTTTTTGGGTTGACCTCAGTTACATCCATCTACCACTTGGATAGGACTGCTGTGTTTGTTCAGTTTAACAAGTCCGAATTGGTTTCTGATTTTCTGGAACTGAAATCGAGACTTGAGAAGAAGAATGATGCTATTTCTGTTTTTCACCCCCTTTCAGAACTTCTGGAAGGTGGAAACACCCGTGCTGCCTCTTATGAGGTATACAAAGAAATTTGTGGTTCCCCCATTTCGAAAGTCCTGTTTGCTGATCAAGCTGAAGCTGTTGGTATTAATTTGAACACCAAATTGTTAGAAAATAAGGTCCAAGAAAATGGTTCGTTTGCGAATTCACAATCTCCAATTGATACCAAGACAGCAGACATCAAACAACCATTAAAGTGTACCTCAGGTAGCAGCAAGTTTCCTAAAGGAGAAATGCTAGATATTGTATCCTGCTGA	2226	41.33	MGGKRWVKEAGGIWEGSDGASQSRGHEEVSETVKEDIGMKQHWMVRAISKTLTLIPIPFHSSRASFSSPSSSFALKNVTRSNFELSLADLRRHVRDSDFVSIDLEMTGVTSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSTKQSFIAHPHNFYIFPRQEVGAYDPSYEFLCQTASIDFLAKYQFDFNLCVKEGISYLSRALEDAARLHLHSTHEDELSESPCTTKEIKDVPLVRMADILFVERMRNKISEWHDDLLQIRNRRSSQIPEDSNDSMNQFQTIFFRMRPAIKLNGFTSRQLRLIKSVIQKSFKDLAYIRVNGASCLEQFIVYTNSRRDLELLMKEVKGDLCKEAEMKIGAAIGFRHVIDLLSSEQKLIVGHNCFLDIAHVCRKFVGPLPSNLEEYVTLVQKNFPYIIDTKILLNASNVLQLKMKKSSTSLSKAFAILCPHIASGVSSSGLAPSSVTVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCIFAQSCSHLNIDFSSHSMLMKEEKLQKYINLLYLSWSCGDIVNIKTGGTTTESSAFNTFKIQPTKILFPNIAIIWGFPSKLKAREIKESLCKVFGLTSVTSIYHLDRTAVFVQFNKSELVSDFLELKSRLEKKNDAISVFHPLSELLEGGNTRAASYEVYKEICGSPISKVLFADQAEAVGINLNTKLLENKVQENGSFANSQSPIDTKTADIKQPLKCTSGSSKFPKGEMLDIVSC	741

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g02155	741	Coils	Coil	252	272	-	-
	Ccar2g02155	741	Pfam	CAF1 family ribonuclease	78	506	IPR006941	-
	Ccar2g02155	741	SUPERFAMILY	Ribonuclease H-like	76	519	IPR012337	-
	Ccar2g02155	741	PANTHER	POLY A -SPECIFIC RIBONUCLEASE-TARGET OF EGR1, MEMBER 1	75	684	IPR051181	GO:0000175(PANTHER)\|GO:0003723(PANTHER)\|GO:0005737(PANTHER)
	Ccar2g02155	741	Gene3D	-	77	242	IPR036397	GO:0003676(InterPro)
	Ccar2g02155	741	Gene3D	-	271	551	IPR036397	GO:0003676(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g02155	K01148	poly(A)-specific ribonuclease [EC:3.1.13.4]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr13:206010	Ccar2g02155	Ccar-Chr2:68753887	dispersed
	Ccar	Ccar-Chr2:14875202	Ccar2g02155	Ccar-Chr2:68753887	dispersed