Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g02156	ATGGCAATGCTTCGCTTGCCTTCCATCCAAGTATGCTGTTTAACAGAGAAGAAGCATAAAGATTCTTCGAGCAAATCATTGAAGTTTGGAGAATCAAATTCAAGAACAGCAACTTACAGAAAAGGTTCTGTTCATCAAGAACGCAAACCCCAGAAGGTGAATCTGGAAATTTCGCCTCATAGAGCTGTGTCTGCTGTGAGGTTAATGCGGATAGAGTTTGGTGGTGCCTTTGCTGACCTTTTAAACGAAAAAGGGAAAGGGTCCGGTGATAACGAGATGGGATATGTTGAAAGAACGCTTGGGTTTTGCACCCGAGATTTGGATGATAGAGATCTCCGATTGATTCTTCGGATTGGATTCTATGAGATTGTAAAGCTAGAGTCCCCTTCATATGCTGTTGTAGATGAGGAAACTAACTCTCTTCCTTCACCTGAACTGGAGGGCGATGACCGTGCACAAGCACGTGCTCTTGCTATTCTTTATTCTCACCCAGTTTGGATGGTGAGGCGGTGGACAAAATACCTTGGACGTGAAGAAGCTATTAAGCTAATGATGGCTAACAGAGGCAAAGGTTTGGTGGTTTCCATTGTTGACCCGCAACCTGGAGAGACAATAATCGACTGTTGTGCTGCTCCCGGAGGGAAGACCCTCTTCATGGCAGCCTGTCTGAATGGGAAAGGTATGGTAACGGCAATTGACATAAATAAAGGACGCTTGAGGATCCTCAAAGAGACGGCCAAACTGCAACTACTTGATGATGTCATCACTACAGAGAATAATAATGAGGCATATGAAAAGGTGTTGTTGGATGCTCCTTGTTCCGGACTTGGTGTTCTTTCCAAGTCGGAAGATATGGAAGAACTTAAAAGTTTGCAAGATGAACTTCTTGATGCAGCTTCCATATTGGTAAAACCTGGTGGAGTGCTTGTGTACAGCACATGCTCGATTGATCCTGAAGAGAATGAAGAGAGGGAATACGACGTAGATTCTGCAGATAGATACATATCGCCTGAATTTTTGACCGAGCAGGGTTACTATTTCTCTAGCCCGGTGAAACATTCTCTCGATGGAGCCTTTGCAGCACGACTCATTCGTAGCTCGTGA	1104	44.47	MAMLRLPSIQVCCLTEKKHKDSSSKSLKFGESNSRTATYRKGSVHQERKPQKVNLEISPHRAVSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFCTRDLDDRDLRLILRIGFYEIVKLESPSYAVVDEETNSLPSPELEGDDRAQARALAILYSHPVWMVRRWTKYLGREEAIKLMMANRGKGLVVSIVDPQPGETIIDCCAAPGGKTLFMAACLNGKGMVTAIDINKGRLRILKETAKLQLLDDVITTENNNEAYEKVLLDAPCSGLGVLSKSEDMEELKSLQDELLDAASILVKPGGVLVYSTCSIDPEENEEREYDVDSADRYISPEFLTEQGYYFSSPVKHSLDGAFAARLIRSS	367

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g02156	367	MobiDBLite	consensus disorder prediction	23	49	-	-
	Ccar2g02156	367	PANTHER	NOP2 YEAST -RELATED NOL1-NOP2-FMU SUN DOMAIN-CONTAINING	184	324	IPR023267	GO:0001510(InterPro)\|GO:0008173(InterPro)
	Ccar2g02156	367	Gene3D	Vaccinia Virus protein VP39	156	365	IPR029063	-
	Ccar2g02156	367	Pfam	16S rRNA methyltransferase RsmB-F	196	324	IPR049560	-
	Ccar2g02156	367	SUPERFAMILY	NusB-like	104	167	IPR035926	-
	Ccar2g02156	367	PRINTS	Viridiplantae FMU-related RCMT signature	66	89	IPR023268	-
	Ccar2g02156	367	PRINTS	Viridiplantae FMU-related RCMT signature	90	106	IPR023268	-
	Ccar2g02156	367	ProSiteProfiles	SAM-dependent MTase RsmB-NOP-type domain profile.	104	366	IPR001678	GO:0008168(InterPro)
	Ccar2g02156	367	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	154	365	IPR029063	-
	Ccar2g02156	367	CDD	AdoMet-MTases	204	312	-	-
	Ccar2g02156	367	PRINTS	RNA (C5-cytosine) methyltransferase signature	265	277	IPR023267	GO:0001510(InterPro)\|GO:0008173(InterPro)
	Ccar2g02156	367	PRINTS	RNA (C5-cytosine) methyltransferase signature	206	216	IPR023267	GO:0001510(InterPro)\|GO:0008173(InterPro)
	Ccar2g02156	367	PRINTS	RNA (C5-cytosine) methyltransferase signature	306	322	IPR023267	GO:0001510(InterPro)\|GO:0008173(InterPro)
	Ccar2g02156	367	PRINTS	RNA (C5-cytosine) methyltransferase signature	348	365	IPR023267	GO:0001510(InterPro)\|GO:0008173(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g02156	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr10:5339514	Ccar2g02156	Ccar-Chr2:68764381	dispersed
	Ccar	Ccar-Chr2:68764381	Ccar8g00562	Ccar-Chr8:17700060	dispersed