AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02164 ATGGAAGAATCGCAAGAGATTTTGTTGAACTCGCTGGCAAACGCTGGAGTTCCGATTCCACCGGAGGTTTTATCAGTTGAAGATCTAGCACCGGAAACCTTGGTGTCGATCTGTGCTCATTCTCTTCGTATAATTTCGAACTCGGAATCCTTTCCGATCACTTTACCGGACTCAATGGCAGATCGTTTCAAAATCTGCACCGATCTGGCTTCGTCAGTCAAAGACCTAGGTTACATCGGCGACATGAGCTTCCATAAGTTCCTGTATCCATCTGAAGAAGACATGTATAAGTTGATAAGATTTTTGGTTGGGAGGCTCTCTGAATCATCTACAACTGCAGTATCACCAAACGCAAAGGATTTGCATACCAAAGTTGAAGACCTGAATCTGAGAAGTCAAGAAGCAGTGTCAAATTCAATCCAATATGCTGAAAAAGATATTGCAGCTGATGACATTAATAGAGATGGGAAATCGAACACTGATAATGTTGGATTGAGTGGTATGGAAAACGGCATAAGTTTAACCGAGGACACCCAGTATTCAAGAAACTCTGCTGGAGGTGACAGAGGGACGAGTCACAAGACAGAAATGTTACTAAATCAAGAAAATGTGACTTCGGATGAAGTGACTGCAAAGTCATTAGAGTTGCAGCGATTGGAAGAGCAACATGATTTGTTGAAAGCGGCTGTGGAAATGGCTTGCGATGAACAAAACTCTGTGGATTCATACATTGTGCAGCTCACCGAGCAAAGAAAAAACCTTGAAGAAGCTTTATGTGCAAAACAACCCGAGTCTCATGAAAAACATCGGAAGTGGAAAAAACTCGAGCAGGACACTGAATCACTGTCGACAGAAATTGAGAAACTACCTAAATTGGCGACAAGAAGATCCTACATTGAACGGATAAAAGAAATCACCAAGAACAGCCGGAAACAGGACATTGACATAGAACGTATCTTAAAAGAGACCCGAGAGCTTCAGTTGGAGAGTAACATGATTCAAGAACGCTTGCATCGAACTTACGCTGTGGTAGATGAAACACTGCTGAGTTTCGAAGAGATATCAGAAAAGATCCTCGCAACCGATCGAGCTCGTAGAGAAGCTACCGAGCTTGAAACTAAGCTTTCTCGTATCGGTACCCAAAGTTTGAACGTGGCGAAACTGGAAGCCGACCTTGACGCCATTCGGAAGGAAAACGAATACCTTCAGTCTCACACTCAGTTGGGTAATCCTTAA 1236 43.04 MEESQEILLNSLANAGVPIPPEVLSVEDLAPETLVSICAHSLRIISNSESFPITLPDSMADRFKICTDLASSVKDLGYIGDMSFHKFLYPSEEDMYKLIRFLVGRLSESSTTAVSPNAKDLHTKVEDLNLRSQEAVSNSIQYAEKDIAADDINRDGKSNTDNVGLSGMENGISLTEDTQYSRNSAGGDRGTSHKTEMLLNQENVTSDEVTAKSLELQRLEEQHDLLKAAVEMACDEQNSVDSYIVQLTEQRKNLEEALCAKQPESHEKHRKWKKLEQDTESLSTEIEKLPKLATRRSYIERIKEITKNSRKQDIDIERILKETRELQLESNMIQERLHRTYAVVDETLLSFEEISEKILATDRARREATELETKLSRIGTQSLNVAKLEADLDAIRKENEYLQSHTQLGNP 411
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02164 411 Pfam CCDC22 protein N-terminal domain 1 107 IPR048349 -
Ccar2g02164 411 Coils Coil 385 405 - -
Ccar2g02164 411 Pfam CCDC22 protein coiled-coil region 271 348 IPR048348 -
Ccar2g02164 411 Coils Coil 209 236 - -
Ccar2g02164 411 PANTHER JM1 PROTEIN 350 405 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02164 K23343 coiled-coil domain-containing protein 22