AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02166 ATGGAGCTGGTTCCATATTCCGATCCTAATACCACCGCCACTTCCACCTCCACTTCCACCTCCACCTCCCCCGCCTCACCGCCGTGGCAAGACATGTTCCGATCAGCCTCCACCCGCAGACCAGATCCACCTCCGCCACCGCCGCCGCTAACCCCACCACAATCCACCACCAATCCAGATCAATACCAGGATCCCTCCGGCGACTCTTCTCTCTCCGGAGACTCTCAGGTACGTCTAGCACTCTACATAGCCATGGCACACGCCGGATTAGCCTTTGCTATTGTTCTCCTCTACGGCGTTTCTAAATTACTTGAGGAATATCTCCGGCCGATTCTCTGGGCGGTTCTTTGTTCGATTCCACTTCGAGGAATCCAACAAACTCTTGTTTCATTTTGGTCTGAGCCTCTGAAATTAGGGCTTACAGAAACTATACTAGCTATACCTGTATCTATTTATAGGGTTTTCATTGAGACACTTGTCGAAATCAGAGATGTGTTGTATAAACTAATTGGTCATAAGAAGAAAAAGAAGAAAGAAATTCGGAGAGGAAAACGAAGTGGGTTTTTGATTTTGTTGAGATGGTTGGTGTCTTTTTGGGTTTTTGTGATGGCTTATGAACAATTTGATGTTCTTGGTGCCATTACCTTGTTAGGGTTAGGGTTTATGTTTACATCTACTAATGTAGAATCTGCTGTTTCTTCGTTTCGAGATCGTAGTTTTAGAAAGAATCGTAATACAGCGTTTCTCACAAAATGGATTTCGAATCGGTTGGAAACGATTGTGGCAATTGGGTTGATTTTTGGTATGATTGTGGGTTCTTTGGCTGGGACTATGTTTTTCTCTTACAAGATTGGAGTTGAGGGGAAAGATGTGGTCTATTCGATAAAATCCCATGTGGAAGAGAGCAATTATACCGAGAAAATCGGGTTGAAACAATGGATGGACGACAACGATGTGGCGGGGATGGTGGATCGATACACTACACAGTTTTACGAAACTGTATATGAACAGATTGATAGTTTAGCAGTGCAGTATAATATGACGGAAATCGTTCAAGAAATGAAACAAATAGTTGCACCACGACCCATTAACTCTTCTACACCATCTACGGCATTGGCATCCCCAAACCCATATGCGGAAAAGATCCTAAGGTTGAAAAAAATGGTTACTAATCGCGAATGGGAAGCAATTTATCCAGAAGTTAACGCCATATTTAAGGAGGCGCGGGTCAGCAGGGAGGATATGATTGAGAAAGCAAAAGCAATTGCTTTTCAAGGAAAAGATGTGGTTCAACGAGTGCTTGCAAGTAGTAAATCGATTGTGGGTGGAAGCACTAAGCTCGTTTTCGTAGTTATCGAGTCGATTGTTTCTGGAGCAGCGGGTATTTTCAATTTTGTTTCTCAGTCGATGGTTTTCATATGGGTTTTGTACTCTTTGATAACATCAAATTCAGGCGGGGTTACTGAACAAGTTATGTATATGATTCCAATTTCAAGATCGACTAGGACTCGGTGTGTTGAGGTTATTGATAAAGCTATTTCTGGGGTTCTTTTGGCGACAGCCGAGATCGCTTTCTTTCAAGGATGTCTCACTTGGCTTTTGTTTAGACTATTTAACATTCATTTCTTGTATATGTCAACGCTGCTTGCGTTTATCAACCCCTTGCTCCCAATATTTCCCTATTTCTTCTCAACGATCCCAGCTGCATTGCAACTGGTGCTGGAAGGTCAATATGTGCTTGCCATTTGCTTGTCGATTATTCATCTTTTGCTTATGGACTATGGTACTACCGAGATTCAAGAGGACATACCTGGGCACAGTGCTTATCTCACTGGACTTAGCATCATCGGTGGAGGAGCGATAATGGGGCCACTGATTACAACTGTTGTTATTGCTCTTAAGGATTTGTATGTAGGATATGTTTTGGATGAACCAAAAGAAAGCAAAAAGGAGTAG 1956 42.89 MELVPYSDPNTTATSTSTSTSTSPASPPWQDMFRSASTRRPDPPPPPPPLTPPQSTTNPDQYQDPSGDSSLSGDSQVRLALYIAMAHAGLAFAIVLLYGVSKLLEEYLRPILWAVLCSIPLRGIQQTLVSFWSEPLKLGLTETILAIPVSIYRVFIETLVEIRDVLYKLIGHKKKKKKEIRRGKRSGFLILLRWLVSFWVFVMAYEQFDVLGAITLLGLGFMFTSTNVESAVSSFRDRSFRKNRNTAFLTKWISNRLETIVAIGLIFGMIVGSLAGTMFFSYKIGVEGKDVVYSIKSHVEESNYTEKIGLKQWMDDNDVAGMVDRYTTQFYETVYEQIDSLAVQYNMTEIVQEMKQIVAPRPINSSTPSTALASPNPYAEKILRLKKMVTNREWEAIYPEVNAIFKEARVSREDMIEKAKAIAFQGKDVVQRVLASSKSIVGGSTKLVFVVIESIVSGAAGIFNFVSQSMVFIWVLYSLITSNSGGVTEQVMYMIPISRSTRTRCVEVIDKAISGVLLATAEIAFFQGCLTWLLFRLFNIHFLYMSTLLAFINPLLPIFPYFFSTIPAALQLVLEGQYVLAICLSIIHLLLMDYGTTEIQEDIPGHSAYLTGLSIIGGGAIMGPLITTVVIALKDLYVGYVLDEPKESKKE 651
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02166 651 MobiDBLite consensus disorder prediction 39 55 - -
Ccar2g02166 651 MobiDBLite consensus disorder prediction 1 71 - -
Ccar2g02166 651 MobiDBLite consensus disorder prediction 56 71 - -
Ccar2g02166 651 PANTHER TRANSMEMBRANE PROTEIN 32 649 IPR002549 -
Ccar2g02166 651 MobiDBLite consensus disorder prediction 7 33 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02166 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
37921 Ccar17g00049 Ccar2g02166
38895 Ccar2g02166 Ccar6g00528
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr17:332363 Ccar2g02166 Ccar-Chr2:68900864 dispersed
Ccar Ccar-Chr2:68900864 Ccar6g00528 Ccar-Chr6:15888711 wgd