AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02213 ATGATTAAAAAGCTGCTCATCACATTCGGTGCTTCCTTTATTTGGCTCGTCTGCTTCATTTACTTTACCCAGGGCTTTAGATCTTTTGTATGGACAGCAGTTTCCTACCAGCTGAAAGACAGATTAAAGCTATCGCCATCGGCTTCTCAATTCGTAACATCCATTTCGTTCTTTCCATGGAGCATAAAACCGATATACGGAATTCTTTCAGATTGTATTCCAGTAAAAGGAAGGAAAAGGATTCCTTATTTAGTCATTGCCACACTGCTCTCCCTCTTTCCATGGGTGATTCTTGGCCTACAGGAATCCATTAGAAATTCCAGACATCAACTCATGATCTTCTTGTTATTACAAAATCTGGGCTCTGCAATGGCAGATGTTGTAATTGATGCAATGATTGCAGAGGCAGCAAGACAGGAAAAAGCTAAATTCGCTGGCGACCTGCAATCACTATCATGGATGACAATGGCTGTTGGTGGAATCTGTGGGAGTTTGTTCGGAGGTTATGCACTAAGTAACTTTCAAATGGGCAGCATATTCTTGCTTTTCTCCGTTTTGCCAACAATTCAGCTATTTTCATGTGGTTTTGTGACGGAAAATCCTATAGGAAGTTCACATTTGCCTGAATTTTCTACTTCTAATGACACCAACATACATCACGAAAATGTATCAGATGAAGATAGATCATCAACCGACATGCCTAAACCAGGTACTTTGATGAGAAAGAGAAGCAATAAAAGTAGCAAGAAATTAACATCTGATACAAGTAAAATACCTGGAAAAGACGGATCTCTGCCATCACAATGGTTTCAATCTTTCAAAGTGGCTGGTTATACTTTGTTCAAAGCTTTTCGTCGCCCAGTGACGATTCCAAACCTTTCAACGGTCATGTTCTACTACCAGACAGAAGTTCTAAATCTAGATGCTTCCTTTCTGGGTACATCACGCGTTATCGGTTGGATGGGCCTCATGCTTGGAACTTTCACTTACAATCGCTATTTAAAGAAGATGAAGTTAAGAAAGATTCTTATGTTTGCTCATGTTACTCTTTCACTGTTGACACTTCTAGATGTAGTATTGGTTTATAGACTACACGTTCCATTTGGCATATCCGATGAAATATTGGTGTTATTTGGGTCTGCTCTCTCAGACGCAGTCCATCAATTCAAGTTCATGCCTTTCTTGATCTTATCAGGACAACTGTGCCCCCCAGGAATAGAAGGGACTCTGTTTGCACTATTCATGTCGATAAACAACTTTGGATCGACAATGAGTTCATTCGTTGGTGCTGGTTTGGCTTCGGTTCTAGACATCTCTTCGGGTTCTTTTGATAATCTTGGTTTCGGGATTGGCATTGAAGTCATCTGCACATTTATACCGGTTGCTTTCTTGTTTTTGATACCAAAGGAAGCAACAGGGATATCAGCTTGA 1431 40.32 MIKKLLITFGASFIWLVCFIYFTQGFRSFVWTAVSYQLKDRLKLSPSASQFVTSISFFPWSIKPIYGILSDCIPVKGRKRIPYLVIATLLSLFPWVILGLQESIRNSRHQLMIFLLLQNLGSAMADVVIDAMIAEAARQEKAKFAGDLQSLSWMTMAVGGICGSLFGGYALSNFQMGSIFLLFSVLPTIQLFSCGFVTENPIGSSHLPEFSTSNDTNIHHENVSDEDRSSTDMPKPGTLMRKRSNKSSKKLTSDTSKIPGKDGSLPSQWFQSFKVAGYTLFKAFRRPVTIPNLSTVMFYYQTEVLNLDASFLGTSRVIGWMGLMLGTFTYNRYLKKMKLRKILMFAHVTLSLLTLLDVVLVYRLHVPFGISDEILVLFGSALSDAVHQFKFMPFLILSGQLCPPGIEGTLFALFMSINNFGSTMSSFVGAGLASVLDISSGSFDNLGFGIGIEVICTFIPVAFLFLIPKEATGISA 476
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02213 476 Pfam BT1 family 24 469 IPR039309 -
Ccar2g02213 476 Gene3D MFS general substrate transporter like domains 11 467 IPR036259 -
Ccar2g02213 476 MobiDBLite consensus disorder prediction 208 263 - -
Ccar2g02213 476 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 4 471 IPR039309 -
Ccar2g02213 476 NCBIfam folate-biopterin family MFS transporter 17 469 IPR004324 GO:0016020(InterPro)
Ccar2g02213 476 CDD MFS-FBT 15 465 - -
Ccar2g02213 476 SUPERFAMILY MFS general substrate transporter 12 472 IPR036259 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02213 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
951287 Ccar Ccar2g02213 Ccar-Chr2:69269649 Ccar3g01539 Ccar-Chr3:36852305